Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1682 ATGCTTTCTCCACCGGACACAAGCAAGACCATGAAGCTAGAACGCTACAACTCTTACATCAGAAAAGTTAACAGCACAAAGCTTCTCAATGCATCTTCCAAGCTTCTCTTCCGTGCCACTCTCCTTATAGCACTCATCCTCGTTTTCCTCTTCACTTTCAACTACCCACCACTCTCTTCATCGGAAAATAACACCAACCACCACTTTCACACGCGCACCAACTTCCTCTCCTCCGCGTTCGGTGGTGGAGCAGCATGGGAGAAACAGGTACGCCACTCCTCCACACCTCGCCGCCCCAACGGCATGTCGGTTCTAGTGACAGGCGCAGCTGGGTTTGTTGGGAGCCACTGCTCCCTTGCTCTTAAGAAACGCGGTGACGGTGTTCTTGGACTTGACAACTTTAATAGTTACTACGACCCATCATTGAAGCGTGCACGACAAGCGCTTCTTAAGCAACACCAAATTTTCATCGTTGAAGGAGATTTGAACGACGCGCCTTTGCTGTCAAAGCTCTTTGATGTGGTGCCATTCACTCACATCCTCCACTTAGCAGCTCAAGCAGGTGTTCGGTATGCCATGCAGAACCCACAATCATACATTAGTTCTAACATTGCGGGTTTTGTGAATCTTCTAGAAGTTGCTAAAACTGCGAAGCCTCAACCAGCTATTGTTTGGGCTTCTTCTAGTTCTGTTTATGGGTTAAACACTGAAAACCCATTCTCGGAGCTCCACCGTACAGACCAACCGGCCAGCCTGTACGCCGCTACTAAAAAAGCCGGCGAGGAAATTGCTCATACTTACAACCATATTTATGGTCTTTCCCTCACCGGATTGCGATTCTTCACTGTTTATGGTCCATGGGGGAGACCCGACATGGCATACTTCTTCTTCACGAAGGATATCCTTCAGGGGAAAAACATAGATGTGTATCAGACAAAGGATGGTAAGGAGGTGGCGCGTGACTTCACATACATAGATGATATAGTGAAAGGGTGTATAGGGGCATTAGACACGGCGGAGAAGAGCACAGGGAGTGGTGGGAAGAAGAAGGGGCCGGCACAATTAAGAATATACAACCTGGGGAACACATCACCGGTGGCGGTGGGGAAATTAGTTGGAATATTAGAAGGGTTGTTGAGCACTAAGGCAAAGAAGCACGTGATCAAGATGCCTGCAAATGGTGACGTACCTTACACGCATGCTAACGTTACTTTGGCTTTTAAGGATTTCGGCTATAAACCCACCACTGATTTGGCCTCTGGTTTGAGGAAGTTTGTTAAGTGGTATGTTGGTTATTATGGGATTCAACCCAGGGTCAAAAAGGACATTCACGATTCCGCTTGA 1344 0.4769 MLSPPDTSKTMKLERYNSYIRKVNSTKLLNASSKLLFRATLLIALILVFLFTFNYPPLSSSENNTNHHFHTRTNFLSSAFGGGAAWEKQVRHSSTPRRPNGMSVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQALLKQHQIFIVEGDLNDAPLLSKLFDVVPFTHILHLAAQAGVRYAMQNPQSYISSNIAGFVNLLEVAKTAKPQPAIVWASSSSVYGLNTENPFSELHRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILQGKNIDVYQTKDGKEVARDFTYIDDIVKGCIGALDTAEKSTGSGGKKKGPAQLRIYNLGNTSPVAVGKLVGILEGLLSTKAKKHVIKMPANGDVPYTHANVTLAFKDFGYKPTTDLASGLRKFVKWYVGYYGIQPRVKKDIHDSA 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1682 447 PANTHER EPIMERASE-RELATED 1 442 - -
Lal17g1682 447 Pfam NAD dependent epimerase/dehydratase family 104 342 IPR001509 -
Lal17g1682 447 Gene3D - 105 416 - -
Lal17g1682 447 PANTHER UDP-D-GLUCURONATE 4-EPIMERASE 6-RELATED 1 442 - -
Lal17g1682 447 PRINTS Nucleotide sugar epimerase signature 130 146 - -
Lal17g1682 447 PRINTS Nucleotide sugar epimerase signature 320 335 - -
Lal17g1682 447 PRINTS Nucleotide sugar epimerase signature 355 370 - -
Lal17g1682 447 PRINTS Nucleotide sugar epimerase signature 395 412 - -
Lal17g1682 447 Gene3D - 281 429 - -
Lal17g1682 447 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 96 435 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1682 Lal-Chr17 17989007 17991197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1682 6 442 Miscellaneous Gene Families AT3G23820 82.735 0.0 757
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1682 K08679 - zju:107422361 791.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1658 4 20630378 20631967 Lal17g1682 17 17989007 17991197 LSH