Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1650 ATGTCTCAGTTTGATAATCGGAATTCTTCAGCTTCTAAGCGTGCTAGGACTGATGGTAGTCGTAGGGAAGATGATTGGACATGCCCCAGCTGTGGCAATGTCAATTTCTCTTTTAGGACAACTTGCAATATGCGTAACTGCACTCAACCAAGGCCGGCGGATCATAATTCTAAATCTGTGGCTAAGCCTCTACAAGTTCCACAGGGTTATTCATCCTCAGGTCCTTATTTAGGTTCCAATACTCCCTTTTCAAGATATCCTGGTGCCCCACCATATGGATCTTCTCTAATCAACGGATCATCTGTTCCCCCCTATGATGTTCCGTATTCGGGAGGATCTGCATATCATTACAATTTTGGAGGTCGCCTTTCTGCTGGCAGCCCTTATAGACCATTTCATTTATCTGGACCAACACCCTACTCAGGTGGATCCATGATTGGTAATGGTGGGATCTATGGCATACCCCCACTGTTGGACCAGTACAGCTTGGGTATGCCTATTGGACCTGGAACCATGGGTCCTAGACCAGGATTTTATCCTGATGACAATTCTCAGAAGAATGGTGCAGCTCGTGACAGTGACTGGAAATGTCCTAAATGTGGTAATGTCAACTTCTCATTCAGAACTGTCTGCAACATGAGAAAGTGCAACACACCCAAGCCTGGATCCCAGTCTTCGAAGTCTGACAGAAACTCTAAGCAAAAGATGCCTGAGGGAAGCTGGAATTGTGAAAAATGTAATAACATTAACTATCCGTTCAGAACCAAGTGCAACAGACAGAATTGTGGTGCTGACAAGCCGGACGAGTCTGAGAAATCCCTTTCACCGGGCCCAGTGAAAAATGATCAGGTAAGCTACCAGTTGCAGAAAGGTTATCGGCCAGTTCACTGA 891 0.4568 MSQFDNRNSSASKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSVAKPLQVPQGYSSSGPYLGSNTPFSRYPGAPPYGSSLINGSSVPPYDVPYSGGSAYHYNFGGRLSAGSPYRPFHLSGPTPYSGGSMIGNGGIYGIPPLLDQYSLGMPIGPGTMGPRPGFYPDDNSQKNGAARDSDWKCPKCGNVNFSFRTVCNMRKCNTPKPGSQSSKSDRNSKQKMPEGSWNCEKCNNINYPFRTKCNRQNCGADKPDESEKSLSPGPVKNDQVSYQLQKGYRPVH 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1650 296 MobiDBLite consensus disorder prediction 262 296 - -
Lal4g1650 296 MobiDBLite consensus disorder prediction 1 25 - -
Lal4g1650 296 MobiDBLite consensus disorder prediction 172 193 - -
Lal4g1650 296 SUPERFAMILY Ran binding protein zinc finger-like 16 54 IPR036443 -
Lal4g1650 296 MobiDBLite consensus disorder prediction 218 239 - -
Lal4g1650 296 PANTHER ZINC FINGER PROTEIN 9 278 - -
Lal4g1650 296 SUPERFAMILY Ran binding protein zinc finger-like 231 269 IPR036443 -
Lal4g1650 296 SMART zf_4 193 219 IPR001876 -
Lal4g1650 296 SMART zf_4 239 265 IPR001876 -
Lal4g1650 296 SMART zf_4 24 50 IPR001876 -
Lal4g1650 296 Gene3D - 182 223 - -
Lal4g1650 296 Gene3D - 13 54 - -
Lal4g1650 296 Gene3D - 227 269 - -
Lal4g1650 296 MobiDBLite consensus disorder prediction 50 76 - -
Lal4g1650 296 MobiDBLite consensus disorder prediction 11 25 - -
Lal4g1650 296 Pfam Zn-finger in Ran binding protein and others 22 44 IPR001876 -
Lal4g1650 296 Pfam Zn-finger in Ran binding protein and others 237 268 IPR001876 -
Lal4g1650 296 Pfam Zn-finger in Ran binding protein and others 193 221 IPR001876 -
Lal4g1650 296 PANTHER OS08G0521400 PROTEIN 9 278 - -
Lal4g1650 296 SUPERFAMILY Ran binding protein zinc finger-like 183 223 IPR036443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1650 Lal-Chr4 20569539 20574340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1650 181 262 EF-hand Containing Proteins AT1G55040 31.707 3.33e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1650 - - lang:109326465 575.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1650 4 20569539 20574340 Lal17g1669 17 17892781 17902391 LSH