Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1669 ATGTCAGAGGTTGATAATCGAAATTCTTCAGCTTCTAAGCGCGCTAGGACTGATGGTAGTCGTAGAGAAGATGATTGGACGTGCCCCAGCTGTGGCAATGTCAATTTCTCTTTTAGGACAACTTGCAACATGCGTAATTGCACTCAATCAAGGCCAGTCGATCATAATTCGAAATATGCGGCAAAGCCTCTACTTGTTCCACGGGGTTATTCATCCTCAGCTCCTTATTTAGGTTCTAGTACCCCCTCTTCAATATATCTTGGTGTCCCACCATACGGATCCTCTATAATTAATGGATCATCTATTCCTCCCTATGATGTTCTGTATTCGGGAGGATCTGCATATCACTACAACTTTGGAGGTCGCCTTTCTGCTGGAAGTCCTTATAGACCATTGCATATATCTGGACCAACACCCTACTCAGGTGGGATCTATGGCATGCCCCCACTGTTGGACCGGTATGGCTTGGGTATGCCTATTGGACCTGGAACAATGGGTCCTAGTCCCGATGACAATTCTCAGAAGGGTGCAGATGCATCTCGTGACAATGACTGGAAATGTCCAAATTGTGGTAACGTCAACTTCTCATTCAGAAATGTTTGCAACATGAGAAAGTGCAACACACCCAAGCCTGGATCCCAGCAGGTTCCAAAGTCTGACAAAAATTCTAAGCAAAAGATGCCCGAGGGAAGCTGGAAGTGTGAAAAATGTAATAACATTAACTATCCATTCAGAACCAAGTGCAACAGACAGAATTGTGGTGCTGACAAGCCAGACGAGTCTGAGAAATCTCTTTCACCATCTCCAGATCAAAATGATCAGGTACTGATTTTCCATGAGGTTCTTTGCAACATAATGAACATCTTAAACTGGGAGGCTGTCGTGAAGCTGTTTAAGTGGTTTCATTGGAAATGTTTTACTTTTGCTTCTTTTCATTTGGATCCTTATATCACAATTTACATATATACTTGCGTGCTACCAGTTGCTGAAAGAGTCAGAAATGGTGGTTCACCAGAGACTGAAGAGGGTTCTTGTGCTGCTGAAGTTTCCACTTGCTCTTCTTTCTTACCGAAAAGGAATGTTTTGCATTCTGAGCCTACCCACAAAAGGAAATAA 1116 0.4319 MSEVDNRNSSASKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQSRPVDHNSKYAAKPLLVPRGYSSSAPYLGSSTPSSIYLGVPPYGSSIINGSSIPPYDVLYSGGSAYHYNFGGRLSAGSPYRPLHISGPTPYSGGIYGMPPLLDRYGLGMPIGPGTMGPSPDDNSQKGADASRDNDWKCPNCGNVNFSFRNVCNMRKCNTPKPGSQQVPKSDKNSKQKMPEGSWKCEKCNNINYPFRTKCNRQNCGADKPDESEKSLSPSPDQNDQVLIFHEVLCNIMNILNWEAVVKLFKWFHWKCFTFASFHLDPYITIYIYTCVLPVAERVRNGGSPETEEGSCAAEVSTCSSFLPKRNVLHSEPTHKRK 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1669 371 MobiDBLite consensus disorder prediction 208 231 - -
Lal17g1669 371 SUPERFAMILY Ran binding protein zinc finger-like 176 213 IPR036443 -
Lal17g1669 371 PANTHER OS08G0521400 PROTEIN 5 281 - -
Lal17g1669 371 MobiDBLite consensus disorder prediction 1 25 - -
Lal17g1669 371 SUPERFAMILY Ran binding protein zinc finger-like 16 52 IPR036443 -
Lal17g1669 371 Pfam Zn-finger in Ran binding protein and others 22 44 IPR001876 -
Lal17g1669 371 Pfam Zn-finger in Ran binding protein and others 228 259 IPR001876 -
Lal17g1669 371 Pfam Zn-finger in Ran binding protein and others 182 211 IPR001876 -
Lal17g1669 371 SMART zf_4 183 209 IPR001876 -
Lal17g1669 371 SMART zf_4 24 50 IPR001876 -
Lal17g1669 371 SMART zf_4 230 256 IPR001876 -
Lal17g1669 371 MobiDBLite consensus disorder prediction 160 182 - -
Lal17g1669 371 Gene3D - 218 260 - -
Lal17g1669 371 Gene3D - 13 53 - -
Lal17g1669 371 Gene3D - 177 213 - -
Lal17g1669 371 PANTHER ZINC FINGER PROTEIN 5 281 - -
Lal17g1669 371 MobiDBLite consensus disorder prediction 9 25 - -
Lal17g1669 371 SUPERFAMILY Ran binding protein zinc finger-like 222 260 IPR036443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1669 Lal-Chr17 17892781 17902391 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1669 - - lang:109326465 509.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1650 4 20569539 20574340 Lal17g1669 17 17892781 17902391 LSH