Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1602 ATGGGAGTTGGAGGCACTCTAGAATACTTGTCTGATTTAATAGGTAGTGGCCATCACAAGAAGAAGAAGAAGAAACAATTGCAGATTGTAGAACTGAAGATTAGAATGGACTGTGATGGCTGTGAACTTAAGGTTAAGAAAACCCTATCTTCATTACATGGAGTGAAATCAGTGGAGATAAAGAGGAAACAGCAGAAAGTGATAGTAAGAGGTTATATAGAGGCAAATAAGGTGTTGAAGAAAGCAAAATCAACAGGGAAGAAAGCAGAAATATGGCCATATGTTCCATATAACATGGTGGCTTATCCATATTCTGCTTCATCTTATGATAAGAAGGCTCCTCCTGGATATGTTAGAAGGGTGGACAACACTGCCAATAATCTTGGAACCATGACATCATATGAAGAACCTTATGTTATGAACATGTTCAGTGATGAAAACCCTAATGCTTGCTCTATCATGTAG 465 0.3806 MGVGGTLEYLSDLIGSGHHKKKKKKQLQIVELKIRMDCDGCELKVKKTLSSLHGVKSVEIKRKQQKVIVRGYIEANKVLKKAKSTGKKAEIWPYVPYNMVAYPYSASSYDKKAPPGYVRRVDNTANNLGTMTSYEEPYVMNMFSDENPNACSIM 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1602 154 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 4 154 IPR045181 GO:0046872
Lal4g1602 154 Pfam Heavy-metal-associated domain 34 88 IPR006121 GO:0046872
Lal4g1602 154 ProSiteProfiles Heavy-metal-associated domain profile. 36 91 IPR006121 GO:0046872
Lal4g1602 154 Gene3D - 16 93 - -
Lal4g1602 154 SUPERFAMILY HMA, heavy metal-associated domain 28 93 IPR036163 GO:0046872
Lal4g1602 154 CDD HMA 31 90 IPR006121 GO:0046872
Lal4g1602 154 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 20 4 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1602 Lal-Chr4 20185264 20186339 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1602 - - fve:101300069 241.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1336 14 14861662 14862936 Lal4g1602 4 20185264 20186339 PCT
Lal19g0894 19 12955340 12957047 Lal4g1602 4 20185264 20186339 PCT