Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0894 ATGGGAGTTGGAGGCACTCTTGAGTACTTGTCTGATCTAATGGGAAGTGGTCATCACCACAACAAGAGAAAGCAATTAAACACTGTAGAGCTGAAGGTAAGGATGGACTGTGATGGTTGTGAGATGAAGGTAAAGAAAACCCTCTCTTCACTAAGTGGAGTAAAATCTGTGGAGATAAACAGAAAGCAACAAAAAGTGACAGTAACTGGGTATGTTGAACCAAACAAGGTGCTAAAGAAGGCAAAGTCAACAGGGAAGAAGGCTGAGATATGGCCTTATGTGCCTTACAATTTGGTGGCTCAGCCTTATGCTGCTACATCTTATGACAAGAAGGCTCCTCCTGGTTATGTGAGAAAAGTGGAGAACACTGCTGCAACTGGAACAGTGATGACAAGATCACATGAAGACCCTTACATCAACATTTTCAGTGATGACAACCCAAATGCTTGTTTTATCATGTAG 462 0.4221 MGVGGTLEYLSDLMGSGHHHNKRKQLNTVELKVRMDCDGCEMKVKKTLSSLSGVKSVEINRKQQKVTVTGYVEPNKVLKKAKSTGKKAEIWPYVPYNLVAQPYAATSYDKKAPPGYVRKVENTAATGTVMTRSHEDPYINIFSDDNPNACFIM 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0894 153 SUPERFAMILY HMA, heavy metal-associated domain 28 92 IPR036163 GO:0046872
Lal19g0894 153 PANTHER - 3 153 - -
Lal19g0894 153 CDD HMA 30 89 IPR006121 GO:0046872
Lal19g0894 153 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 3 153 IPR045181 GO:0046872
Lal19g0894 153 ProSiteProfiles Heavy-metal-associated domain profile. 35 90 IPR006121 GO:0046872
Lal19g0894 153 Pfam Heavy-metal-associated domain 32 87 IPR006121 GO:0046872
Lal19g0894 153 Gene3D - 23 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0894 Lal-Chr19 12955340 12957047 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0894 - - fve:101300069 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g0894 19 12955340 12957047 Lal19g0894 19 12955340 12957047 ECH
Lal14g1336 14 14861662 14862936 Lal19g0894 19 12955340 12957047 LSH
Lal19g0894 19 12955340 12957047 Lal4g1602 4 20185264 20186339 PCT