Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1592 ATGACAACAACAACCACCACGTTTCATTTACACCTTCTCCCGCCGTTACACAACGCCGTTAACCACCACCACTTCCGTTACATCTGCACCTCGAAACGCCGCCGTATCAACCTATTATCCACGCGCCAATCACATCGCGTAACCGCAGCGCGAAATTCCGAAAACTCTAACTACTCCGATGGCACAACAGTAATTTCCGAAGCTCCACGAAGCACCAGAAGAACCGTGCTGGTGGCGCCGTTTTTCGCCGCCGCCGCGTCGTTTCTACTATCAGCAAGAGCAGAAGAGAAAACTTCGCCGGCGCCGGCGGCAACACCTCCGTCGACGACGGAATTGACGGTTTCGAAGCCGGAGGAGCAGAAGGAGGAGGTTATAGCGTCAAGGATTTATGACGCGACGGTTATCGGAGAACCGATGGCGATAGGGAAGGAGAAAGGGAAGGTGTGGGAGAAGTTGATGAATGCAAGAGTTGTGTATTTAGGTGAAGCAGAGCAGGTTCCGGTTCGTGATGATAAGGAATTGGAGCTTGAGATTGTGAAGAAGTTGCATAAGATGTGTTTGGAGAATGATAAGCTTTTGTCTTTGGCACTTGAAGCTTTTCCTTCTAATCTTCAACAACAGCTTAATCAGTATTTGGATAACAAGATAGATGGAGAAACTTTGAAGTCATATATGTTGCATTGGCCGCTTGAAAGATGGCAGGAGTATGAACCTACTCTTAATTACTGTCGTGAAAATGGAATTCGTCTTGTTGCTTGTGGCACCCCACTAGCGATCTTAAGGACTGTCCAAGCAGAAGGAATTAGTGGGCTTTCAAAGGCTGATCGTAAAGCATATGCACCTCCGGCTGGTTCAGGCTTCATATCAGGCTTTACTTCTATCACACGCAGATCAAAAGTTGATAGTACTCTAAATCCGTCTGTTCCTTTTGGTCCAAGCTCATATCTATCTGCACAGGCTAGAGTAGTTGATGAGTATACTATGTCGCAGATCATCTTGCACAATGTGCTTGAAGGGGGAGCCACTGGTATGTTAATAGTTGTGACTGGTGCAAGCCATGTTACATATGGATCTAGAGGAACTGGAGTCCCAGCAAGAATTTCAAGAAAAATTCAAAAGAAAAACCAAGTAGTTATATTACTTGACCCTGAACGACAATTCATTCGCAGAGAGGGAGAAGTTCCTGTAGCCGATTTTTTGTGGTATTCTGCTGCCAGACCCTGTAGTAGAAATTGCTTTGACCGTGCTGAGATTGCTCGTGTTATGAATGCTGCTGGGCGGAGGCGAGATGCCCTCCCACAGGATCTTCAGAAGGGAATTGATCTTGGTTTAGTATCACCAGAGGTATTGCAGAACTTCTTTGATCTAGAGCAGTATCCTCTGATTTCAGAACTCACTCACCGATTCCAGGGTTTCAGGGAACGATTGTTGGCAGATCCCAAATTCTTGCACAGATTAGCCATAGAAGAAGCTATATCAGTAACTACTACACTATTAGCACAATATGAAAAGCGGAAAGAAAACTTTTTCCAAGAGCTTGACTATGTTATTACTGACAGTGTCAGAGGATCAGTTGTTGATTTCTTTACAGTGTGGCTTCCTGCACCAACTTTGTCATTCCTTTCATATGCTGATGAGACAAATGCACCTCAAAATATTGATTCTTTAATAGGTCTTCTTGGCTCCATCCCAGACAATGCATTTCAAAAGAATCCAGTAGGAACTAACTGGAATCTAAATCATAGAGTTGCATCAGTTGTATTCGGTGGTTTAAAACTTGCTTCTGTTGGATTTATTTCAAGCATAGGAGCTGTTGCTTCATCAAATTCTCTGTTTGCAATTCGTAACTTCTTTAATCCAGCAGTTGTCACTAATCAACAAGTTCTAAGGTCACCAATACTCAAAACAGCAGTTGTCTATGCATGCTTTCTTGGAGTGTCTGCAAATCTCCGCTATCAGATAATTGCTGGGTTAGTGGAGCATCGGATTTCTGATCAATTTGCATCCCAAACATTTCTTGTAAATATGCTATCATTTGTAACAAGGACAATCAATTCGTATTGGGGAACCCAGCAATGGATTGACCTTGCCCGCTTTACCGGGCTGCAAGTTAGAAAGACAGAGTCACCTGCACCAGAGTCTCTTATTGCAGTGGCATGCAACAAAACAGAAGAGGCTAGCATTGATGAGATAAAAAATGAATGA 2205 0.4381 MTTTTTTFHLHLLPPLHNAVNHHHFRYICTSKRRRINLLSTRQSHRVTAARNSENSNYSDGTTVISEAPRSTRRTVLVAPFFAAAASFLLSARAEEKTSPAPAATPPSTTELTVSKPEEQKEEVIASRIYDATVIGEPMAIGKEKGKVWEKLMNARVVYLGEAEQVPVRDDKELELEIVKKLHKMCLENDKLLSLALEAFPSNLQQQLNQYLDNKIDGETLKSYMLHWPLERWQEYEPTLNYCRENGIRLVACGTPLAILRTVQAEGISGLSKADRKAYAPPAGSGFISGFTSITRRSKVDSTLNPSVPFGPSSYLSAQARVVDEYTMSQIILHNVLEGGATGMLIVVTGASHVTYGSRGTGVPARISRKIQKKNQVVILLDPERQFIRREGEVPVADFLWYSAARPCSRNCFDRAEIARVMNAAGRRRDALPQDLQKGIDLGLVSPEVLQNFFDLEQYPLISELTHRFQGFRERLLADPKFLHRLAIEEAISVTTTLLAQYEKRKENFFQELDYVITDSVRGSVVDFFTVWLPAPTLSFLSYADETNAPQNIDSLIGLLGSIPDNAFQKNPVGTNWNLNHRVASVVFGGLKLASVGFISSIGAVASSNSLFAIRNFFNPAVVTNQQVLRSPILKTAVVYACFLGVSANLRYQIIAGLVEHRISDQFASQTFLVNMLSFVTRTINSYWGTQQWIDLARFTGLQVRKTESPAPESLIAVACNKTEEASIDEIKNE 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1592 734 CDD ChanN-like 156 380 IPR007314 -
Lal4g1592 734 Gene3D - 120 406 - -
Lal4g1592 734 Pfam Protein RETICULATA-related 474 658 IPR021825 -
Lal4g1592 734 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 35 734 - -
Lal4g1592 734 PANTHER PROTEIN RETICULATA-RELATED 5, CHLOROPLASTIC 35 734 - -
Lal4g1592 734 SUPERFAMILY EreA/ChaN-like 147 403 - -
Lal4g1592 734 MobiDBLite consensus disorder prediction 97 118 - -
Lal4g1592 734 Pfam Haem-binding uptake, Tiki superfamily, ChaN 148 367 IPR007314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1592 Lal-Chr4 20109738 20116617 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1592 - - gmx:100810366 1105.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1592 4 20109738 20116617 Lal4g1592 4 20109738 20116617 ECH
Lal4g1592 4 20109738 20116617 Lal17g1599 17 17371274 17377058 LSH