Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1569 ATGAAGACAGAAAAACTTTGGCATCTTGGCTTGGGTGATATGCAGATCTTATCCGGGTCTCGCCACCGTCATTCCATGAAGAACCCAATTTGGATCATAGTCTTGGTTTTATTTGTGTTCGTGTTTCTAATATGTGCTTATATGTACCCACCAAAAAACAGTTTGGGTTGTTATGTGTTTTCTTCTAGTCGGTGCAATGGTGTTGCTGATTGGCTTCCACCTGTTACTGCAAGGGTATACACAGATGACGAGATTGCATCACGTGTTGTTATGAAGGATATTTTGAATACGCCCTCAGTACTTTCAAAGAATCCAAAAGTCGCCTTCATGTTTTTGACCCCTGGTTCTCTACCATTTGAAAGTTTGTGGGATAAGTTTTTCCAAGGCCATGAAGGCAAGTTCTCTGTTTATGTGCATGCATCTAAGACCAAACCAGTTCACGTGAGCCGTTATTTTGTTAATCGGGACATCCGTAGTGATCAGGTGGTGTGGGGGAAAATTTCTATGGTGTCAGCAGAGAGGCGGCTACTAGCAAATGCTTTACAAGATCCTGATAACCATCACTTTGTTTTACTTTCTGATAGCTGCGTGCCACTGTATAACTTTGACTATATTTTCAATTATCTGATGCATACAAATATCAGCTTTGTGGACTGCTTTAAGGATCCAGGTCCTCATGGCAATGGCAGGTATTCAGAACACATGTTACCTGAAGTTGAAATGAAGAACTTCAGAAAGGGAGCACAGTGGTTTTCTTTGAAGCGGCAGCATGCTGTTATGGTTATGGCTGACAACCTATACTACTCAAAATTTCGGGCTCATTGTCAGCCGGGTTTGCATGGGAAAAATTGCATTGCTGATGAGCATTACTTACCTACATTCTTCCAGATTGTTGACCCAGGTGGAATCGCAAACTGGTCAGTAACTCATGTTGACTGGTCTGAGAGAAAATGGCATCCCAAATCATATAGGACAGAGGATATTACATATGAGCTTTTGAAGAATATTACGTCCATTGATGTTAGTGTGCATGTCACCAGTGATGAGAAGAAAGAAATGCAAAGATGGCCTTGCTTATGGAATGGAATTCAGAAGCCATGTTACCTATTTGCTAGGAAATTCACTCCTGGAACAATGGACAATCTGTTGCAGCTTTTTTCCAATTACTCAACACCTTGA 1179 0.4131 MKTEKLWHLGLGDMQILSGSRHRHSMKNPIWIIVLVLFVFVFLICAYMYPPKNSLGCYVFSSSRCNGVADWLPPVTARVYTDDEIASRVVMKDILNTPSVLSKNPKVAFMFLTPGSLPFESLWDKFFQGHEGKFSVYVHASKTKPVHVSRYFVNRDIRSDQVVWGKISMVSAERRLLANALQDPDNHHFVLLSDSCVPLYNFDYIFNYLMHTNISFVDCFKDPGPHGNGRYSEHMLPEVEMKNFRKGAQWFSLKRQHAVMVMADNLYYSKFRAHCQPGLHGKNCIADEHYLPTFFQIVDPGGIANWSVTHVDWSERKWHPKSYRTEDITYELLKNITSIDVSVHVTSDEKKEMQRWPCLWNGIQKPCYLFARKFTPGTMDNLLQLFSNYSTP 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1569 392 Pfam Core-2/I-Branching enzyme 107 336 IPR003406 GO:0016020|GO:0016757
Lal4g1569 392 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 1 391 - -
Lal4g1569 392 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 1 391 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1569 Lal-Chr4 19864438 19870725 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1569 - - gmx:100817202 696.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1569 4 19864438 19870725 Lal4g1569 4 19864438 19870725 ECH
Lal14g1694 14 17109894 17115264 Lal4g1569 4 19864438 19870725 PCT
Lal19g1249 19 15693904 15699354 Lal4g1569 4 19864438 19870725 PCT
Lal4g1569 4 19864438 19870725 Lal14g1694 14 17109894 17115264 PCT
Lal4g1569 4 19864438 19870725 Lal19g1249 19 15693904 15699354 PCT