Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1249 ATGAAAGCGAAAGTTTGGCGTGTAGGCATGGGTGATTTGCACATAATGCCTGGCTCGCGCCACCGTCCTCATATGAAGAAGCCAATGTGGATCATTGTGTTGGTTCTATTTGTATGTTTCTTTTTAATCTGTGCTTATATCTATCCGCCACAAAGCAGTTCCGGCTGTTATGTCTTCTCTTCTAGAGCCTGCAAGGGTTTTACTGATTGGCTTCCACCTCTTCCTGCAAGAGAATACACCGATGACGAGATTGCAGCACATGTTGTTATTAGGGATATTTTGAAGTCACCACCAATTGTTTCCAAAAATTCTAAAGTTGCTTTCATGTTTTTGTCGCCTGGTTCTTTGCCATTTGAAAGATTGTGGGACAAGTTTTTCCAAGGTCATGAAGGGAAGTTCTCTGTTTATGTGCATGCATCCAAGACTAAGCCAGTTCATGTGAGCCGATATTTTCTTAATCGGGATATTCACAGTGACCAGGTGGTGTGGGGGAAAATTTCTATGGTTGATGCAGAGAGACGGCTATTGGCAAATGCCCTTCAAGATCCTGACAACCTGCAATTTGTTTTACTTTCTGATAGCTGTGTGCCTTTGTATAATTTTGATTATATTTACAACTACCTGATGCATACAAATATCAGCTTTGTAGACTGCTTTAAGGATCCTGGCCCTCATGGTAATGGAAGATATTCAGAACACATGTTACCTGAAATTGAGGTGAAGGACTTTAGAAAGGGGGCACAGTGGTTTTCTATGAAGCGACAGCATGCTGTTTTAGTTATGGCTGATCATCTGTATTACTCAAAATTCCGGGCATACTGTCAGCCAGGTTTGGACGGGAAGAATTGCATTGCAGATGAACATTACTTGCCAACTTTCTTCCAGATGGTTGATCCTGGTGGCATTGCAAACTGGTCATTAACGCATGTTGACTGGTCTGAGAGAAAATGGCATCCAAAATCATATATGACTCAGGATGTTACGTATGAGCTTCTGAAGAATATTACGGTACATGACTGGATATTCATGATAAGTGGTATATTTATATGCAGTCCATTGATGTTAGTGTGCATGTCACCAGTGATGAGAAGAGAGAGGTGCAAAGATGGCCTTGCTCATGGAATGGGATTCAGAAGCCATGTTACCTATTTGCGAGGAAATTCACACCTGAAACACTGGATAAATTACTGCATCTATTTTCTAATTATTCAACACCGTGAGGCAGCCAGCTATTTTGGTTCATTCTTTGGTCCGATAAGTTGA 1263 0.4133 MKAKVWRVGMGDLHIMPGSRHRPHMKKPMWIIVLVLFVCFFLICAYIYPPQSSSGCYVFSSRACKGFTDWLPPLPAREYTDDEIAAHVVIRDILKSPPIVSKNSKVAFMFLSPGSLPFERLWDKFFQGHEGKFSVYVHASKTKPVHVSRYFLNRDIHSDQVVWGKISMVDAERRLLANALQDPDNLQFVLLSDSCVPLYNFDYIYNYLMHTNISFVDCFKDPGPHGNGRYSEHMLPEIEVKDFRKGAQWFSMKRQHAVLVMADHLYYSKFRAYCQPGLDGKNCIADEHYLPTFFQMVDPGGIANWSLTHVDWSERKWHPKSYMTQDVTYELLKNITVHDWIFMISGIFICSPLMLVCMSPVMRRERCKDGLAHGMGFRSHVTYLRGNSHLKHWINYCIYFLIIQHREAASYFGSFFGPIS 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1249 420 Pfam Core-2/I-Branching enzyme 106 335 IPR003406 GO:0016020|GO:0016757
Lal19g1249 420 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 11 362 - -
Lal19g1249 420 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 11 362 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1249 Lal-Chr19 15693904 15699354 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1249 - - gmx:100817202 645.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1249 19 15693904 15699354 Lal19g1249 19 15693904 15699354 ECH
Lal14g1694 14 17109894 17115264 Lal19g1249 19 15693904 15699354 LSH
Lal19g1249 19 15693904 15699354 Lal4g1569 4 19864438 19870725 PCT
Lal4g1569 4 19864438 19870725 Lal19g1249 19 15693904 15699354 PCT