Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal4g1529 | ATGACTTCTACTTCAGCACTTTCAATGATGACCATGCCACTAAACCAGAAAAGGGTCTTGGTTGCTACCTCTGAGTCATTCTTCAAGTCACTGCCACTAAGAGCTTCAAAGGGTGTTGTTGTTGCAGCAACAAAACACAATGTAAGGTTTCAAGTAAGAGCTTCATCCATGAAGGAGAAAGTTGTGACAGGACTCAGTGCAGTTGCAATGACAGCTTCAATGATTGTTCCTGATATGGCTGAAGCTGCTGCAACACCACCTTCTCTCAAGAACTTCTTGCTCAGCATTGTGGCTGGTGGAGTTGTGCTTGGAGTCATTATTGGTGCTGTGGTTGGTGTATCCAATTTTGATCCTGTTAAGAGAGGCTAA | 369 | 0.439 | MTSTSALSMMTMPLNQKRVLVATSESFFKSLPLRASKGVVVAATKHNVRFQVRASSMKEKVVTGLSAVAMTASMIVPDMAEAAATPPSLKNFLLSIVAGGVVLGVIIGAVVGVSNFDPVKRG | 122 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal4g1529 | 122 | Gene3D | Single helix bin | 85 | 122 | - | - | |
| Lal4g1529 | 122 | PANTHER | EXPRESSED PROTEIN | 1 | 121 | - | - | |
| Lal4g1529 | 122 | PANTHER | OS07G0673550 PROTEIN | 1 | 121 | - | - | |
| Lal4g1529 | 122 | Pfam | Photosystem II reaction centre X protein (PsbX) | 87 | 121 | IPR009518 | GO:0009523|GO:0015979|GO:0016020 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lal4g1529 | Lal-Chr4 | 19401184 | 19401552 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lal4g1529 | - | - | gmx:100306291 | 119.783 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lal4g1529 | 4 | 19401184 | 19401552 | Lal4g1529 | 4 | 19401184 | 19401552 | ECH | |
| Lal17g1503 | 17 | 16446233 | 16446601 | Lal4g1529 | 4 | 19401184 | 19401552 | LSH |