Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1503 ATGGCTTTTACTTCAGCAGTTTCCATGACCATGCCACTAACTTATGCCAACCAGAAAAGGATGGTGGTTCCAATTTCTGAGGCATTCTTAAAGCCACTGCCTTTAAGGCCTTCAAAGACTTTGGCAGCATCAAAACAGAATGGAAGGTTTCAAGTAAGGGCTTCCTCCATGAAGGAGAAAGTCATGACAGGGATCACTGCAGCTGCGTTGACAGCTTCGATGATTGTTCCTGATGTTGCTGAAGCTGCTGCTGTACCACCTTCTCTCAATAACTTCTTGCTCAGCATCGCCGCTGGTGGAGTTGTGCTTGGAGTCATTATTGGTGCTGTGGTTGGTGTATCCAATTTCGATCCGGTCAAGCGAGGCTGA 369 0.4715 MAFTSAVSMTMPLTYANQKRMVVPISEAFLKPLPLRPSKTLAASKQNGRFQVRASSMKEKVMTGITAAALTASMIVPDVAEAAAVPPSLNNFLLSIAAGGVVLGVIIGAVVGVSNFDPVKRG 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1503 122 Pfam Photosystem II reaction centre X protein (PsbX) 87 121 IPR009518 GO:0009523|GO:0015979|GO:0016020
Lal17g1503 122 PANTHER OS07G0673550 PROTEIN 1 121 - -
Lal17g1503 122 PANTHER EXPRESSED PROTEIN 1 121 - -
Lal17g1503 122 Gene3D Single helix bin 84 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1503 Lal-Chr17 16446233 16446601 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1503 - - gmx:100306291 153.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1503 17 16446233 16446601 Lal17g1503 17 16446233 16446601 ECH
Lal17g1503 17 16446233 16446601 Lal4g1529 4 19401184 19401552 LSH