Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1497 ATGACCACTTCTTTCAAGGAGAGGGTTGATGCAATTCTTACTGGTCACAAAAATGACATTTTGGCCCTTCTGTCAAGGATTGAAGCCAAGGGCAAGGTAATCTTGAACCACCAACAAGTCATTGCTGAATTGGAAGAAATCCCACAAGAGAATAAGAAAAACCTAGTTGATGGGGCCATTGGAGAAGTTTTGATATCCATCCAAGAAGCTATAGTTTTGCCACCATTTATCGCATTGGCTGTTCGTCCGAAGCCCGGTGTATGGAAGTATATACGCGTGGAAGCGAACAAACTTGTAGTTGATGAGTTGCCTGTTGCTGAGTATTTGAAATTCAAGGAGGAAGTTATTGATGGAAGTTCCGATGGCAAATTTGTGCTTGAGTTGGACTTTGAACCATTTAATGCATCCTTTCCAAAACCAACTTCGAACAAGTCAATTGGTAATGGTGTGGAGTTCCTGAACCGCCATCTTTCTGCAAAACTCTTCCATGATAAGGAGAGCTTGAATGCATTGCTGGAATTCCTCAAGCTTCATAGCTATAATGGACAGAATTTGCTGTTGAATGATAAAATTCAAAAAGTGGATGCTCTCCAACAAGCTCTAAGGAAAATAGAAGAGTATTTGGTCACACTTGCTCCTGAAACACCCTACTCAGAATTTGAGAATAAACTCCAAGAAATTGGTTTGGAGAGAGGATGGGGCAACAACGCCGAGCGCGTCCTCGAGTTGATTGGACAACTCTTAGATCTTCTTGAGGCACCTGAGCCCCACACCCTTGAGACATTCCTAGGAAGTATCCCTATAGTCTTCAATGTTGTTATCCTTTCTCCACATGGTTACTTTGCCCAAGATAATGTCTTAGGATACCCTGACACCGGAGGCCAGGTTGTTTACATCTTGGATCAAGTTCGTGCCTTAGAGATTGAGATTCTCAACCGCAACAAGAAACAAGGCTTGGATATCACCCCTCGCATTCTCATTATCACTCGTCTTCTACCTGATGCAGTAGGAACTACTTGTGGCCAACGTCTTGAGAAGGTATATAATACTGAACATTGCTACATTCTTCGAGTTCCCTTCCGAACAGAGAAGGGCATTGTTCGCAAATGGATCTCAAGATTCGAAGTATGGCCTTACCTAGAGACTTTTGCTGAGGATGTTGCTCTTGAACTTGCCAAAGAGTTACAAGGCAAGCCCGATCTGATTGTTGGAAACTATAGTGATGGAAACATTGTTGCATCTTTGTTAGCACATAAATTTGATGTAACTCAGTGTACCATTGCTCATGCACTTGAAAAGACCAAATATCCTGAATCTGATATTTACTGGAAAAAATTCGATGATAAATATCACTTCTCTAGCCAATTTACTGCTGATCTTTTTGCAATGAACCACACAGACTTTATTATCACTAGTACCTTCCAAGAGATTGCTGGAAGCAAGAATACTCTTGGGCAATATGAAAGTCACACTGCCTTCACCCTACCTGGACTCTACCGTGTTGTTCATGGCATTGATTCTTTCGATCCTAAGTTCAATATTGTCTCTCCGGGTGCCGACTTGAGCATTTACTTCTCCTATACTGAAACCGAGCGTAGGTTGACAAAGTTCCACCCAGATATTGAAGAGCTTCTTTACAGCTCAGTAGAGAATGAGGAGCACATAGGTGTATTGGCGGACCGCAACAAGCCAATTATCTTCACCATGGCAAGGTTGGACCGTGTGAAGAACATAACAGGACTTGTTGAGTGGTATGGCAAGAATGCACGCCTCCGTGAGTTAGTAAACCTTGTTGTTGTTGCTGGAGATAGGAGGAAGGATTCAGGGGACTTAGAAGAGAAAGCCGAGACAAAGAAGATGTATGGCCTAATTGAGACATACAAGTTGAATGGACAGTTCAGATGGATTTCCTCTCAGATGGATCGGGTGAGGAATGGTGAACTCTATCGTGTCATTTGTGACACAAAGGGTGCTTTTGTGCAGCCAGCTGTTTATGAAGCTTTTGGTTTGACTGTTGTTGAGGCCATGACTTGTGGATTGCCAACATTTGCTACTAGTAATGGAGGTCCTGCTGAGATCATTGTTCATGGAAAATCTGGATACCACATTGACCCTTACAATGGTGACCAAGTTGCTGAGCTCCTTGTTGACTTCTTTGAGAAGAGCAAGATAGATCCTTCTCACTGGGACAAAATCTCTCATGGTGGTCTGAAGCGTATTCATGAGAAGTATACATGGCAAATTTACTCTGAAAAGCTTCTAACTCTCACTAGTGTGTATGGTTTCTGGAAGCATGTGACTAAACTTGAACGCCGTGAGCACAAACGTTACCTTGAGATACTCTATGCCCTTGGGTTCAGCAAATTGGCTCACTCTGTGCCCCTTGCTATTGAAGAATGA 2400 0.4275 MTTSFKERVDAILTGHKNDILALLSRIEAKGKVILNHQQVIAELEEIPQENKKNLVDGAIGEVLISIQEAIVLPPFIALAVRPKPGVWKYIRVEANKLVVDELPVAEYLKFKEEVIDGSSDGKFVLELDFEPFNASFPKPTSNKSIGNGVEFLNRHLSAKLFHDKESLNALLEFLKLHSYNGQNLLLNDKIQKVDALQQALRKIEEYLVTLAPETPYSEFENKLQEIGLERGWGNNAERVLELIGQLLDLLEAPEPHTLETFLGSIPIVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEILNRNKKQGLDITPRILIITRLLPDAVGTTCGQRLEKVYNTEHCYILRVPFRTEKGIVRKWISRFEVWPYLETFAEDVALELAKELQGKPDLIVGNYSDGNIVASLLAHKFDVTQCTIAHALEKTKYPESDIYWKKFDDKYHFSSQFTADLFAMNHTDFIITSTFQEIAGSKNTLGQYESHTAFTLPGLYRVVHGIDSFDPKFNIVSPGADLSIYFSYTETERRLTKFHPDIEELLYSSVENEEHIGVLADRNKPIIFTMARLDRVKNITGLVEWYGKNARLRELVNLVVVAGDRRKDSGDLEEKAETKKMYGLIETYKLNGQFRWISSQMDRVRNGELYRVICDTKGAFVQPAVYEAFGLTVVEAMTCGLPTFATSNGGPAEIIVHGKSGYHIDPYNGDQVAELLVDFFEKSKIDPSHWDKISHGGLKRIHEKYTWQIYSEKLLTLTSVYGFWKHVTKLERREHKRYLEILYALGFSKLAHSVPLAIEE 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1497 799 Gene3D - 139 268 - -
Lal4g1497 799 Gene3D Glycogen Phosphorylase B; 520 746 - -
Lal4g1497 799 PANTHER SUCROSE SYNTHASE 3 798 - -
Lal4g1497 799 Pfam Sucrose synthase 3 546 IPR000368 GO:0005985|GO:0016157
Lal4g1497 799 TIGRFAM sucr_synth: sucrose synthase 18 795 IPR012820 GO:0005985|GO:0016157
Lal4g1497 799 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 288 756 - -
Lal4g1497 799 Gene3D Glycogen Phosphorylase B; 273 788 - -
Lal4g1497 799 Pfam Glycosyl transferases group 1 552 729 IPR001296 GO:0016757
Lal4g1497 799 Gene3D - 18 138 - -
Lal4g1497 799 Coils Coil 187 207 - -
Lal4g1497 799 PANTHER - 3 798 IPR012820 GO:0005985|GO:0016157
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1497 Lal-Chr4 19122341 19128258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1497 4 799 Glycosyltransferase AT3G43190 77.764 0.0 1300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1497 K00695 - gmx:100819730 1366.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1497 4 19122341 19128258 Lal4g1497 4 19122341 19128258 ECH
Lal14g1631 14 16699812 16705107 Lal4g1497 4 19122341 19128258 PCT
Lal7g1031 7 16466167 16476318 Lal4g1497 4 19122341 19128258 PCT
Lal19g1179 19 15237463 15242575 Lal4g1497 4 19122341 19128258 PCT
Lal4g1497 4 19122341 19128258 Lal14g1631 14 16699812 16705107 PCT
Lal4g1497 4 19122341 19128258 Lal7g1031 7 16466167 16476318 PCT
Lal4g1497 4 19122341 19128258 Lal19g1179 19 15237463 15242575 PCT