Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1179 ATGGCTACAACTGATCGTTTGACCCGAGTTTACAGTCTCCGTGAGAGGATTGATGAAACCCTCAGTACTAATAGGAATGAAATTCTGACCCTTCTCTCAAGGATTGAAAGCAAGGGCAAGGGACTCCTACAACACCATCAGATTATTGCTGAGTTTGAAGAAATCCCTGAGGACAATAGAAAGAAACTAAGTAATGGTCCATTTGGTGAAGTTTTGAGATCCACACAGGAAGCCATAGTTTTAGCACCATGGATTGCTTTGGCTGTTCGTCCAAGGCCTGGTATTTGGGAGTACCTGAAAGTGAATGTGCATGCTCTTGTTGCTGAGGAGTTGAAAGCTGCTGAGTACCTGAAATTCAAGGAGGAACTAGTGGATGGAAGTTCTAATGGCAACTTTGTTCTTGAATTGGACTTTGAACCATTTAATGCATCTTTCCCTCGCCCAACTCTGAACAAGTCAATTGGAAATGGTGTTCAATTCCTCAACCGCCACTTGTCGGCCAAACTCTTCCACGACAAGGAGAGCTTGCATCCACTTCTGGAATTCCTCAGATCTCACAGCTACAATGGAAAGACATTGATGCTGAATGGCAGAATTCAGACACCAGATTCTCTTCAAAATGTTCTAAGGAAAGCTGAAGAGTATCTAAGCACACTTGCTCCTGAAACACCCTACTCTGAATTTGAACACAGATTCCAGGAGATTGGTTTGGAAAGGGGGTGGGGTGACACCGCCGAGCGTGTCCTTGAAATGATCCAACTTCTCTTGGATCTTCTTGAGGCACCTGACCCTTTTACCCTTGAGACATTCATTGGAAGAATCCCAATGGTCTTCAATGTTGTTATCCTTTCTCCCCATGGTTACTTTGCACAAGATAATGTCTTGGGATACCCTGATACTGGTGGCCAGGTTGTTTACATCTTGGATCAAGTTCGTGCCTTGGAGAATGAGATGCTCAAACGCATTAAGCAACAAGGCTTGGATATCGTCCCTCGCATTCTCATTATCACCCGTCTTCTCCCTGAGGCAGTAGGAACTACTTGTGGCCAACGTCTTGAGAAGGTATATGATACTGAACATTGCCACATTCTTCGAGTTCCCTTTAGAACTGAGAATGGAATTGTTCGCAAATGGATCTCCAGATTCGAAGTCTGGCCCTACCTAGAAACTTACACAGAGGATGTTGCCCATGAACTCTCTAAGGAGTTACAAGGCAGGCCAGATCTGATTGTTGGAAACTATAGTGATGGAAACATTGTTGCCTCTCTGTTGGCACATAAGTTAGGTGTCACTCAGTGTACCATTGCTCACGCACTTGAGAAGACCAAATATCCCGAATCTGACATTTACTGGAAAAAATTCGATGAGAAATATCACTTCTCTTCCCAATTTACAGCTGATCTTTTTGCAATGAACCACACAGACTTTATTATCACCAGTACCTTCCAAGAGATTGCTGGAAACAAGGATACTGTTGGGCAGTATGAGAGTCACACTGCCTTCACCCTTCCTGGACTCTACCGTGTTGTACACGGTATCGATGTCTTTGACCCAAAGTTCAACATTGTCTCTCCTGGAGCTGACCAGACCATTTACTTCCCTTACACCGAAACTAGCCGTAGGTTGACATCCTTCCACCCTGAGATTGAAGAGCTTCTTTACAGCTCAGTGGAGAATGAAGAGCACATATGTGTATTGAAGGACCGCAACAAGCCAATTATCTTCACCATGGCACGGTTGGACCGGGTGAAGAACATTACAGGACTTGTGGAGTGGTATGGTAAGAATGCTCGCCTCCGCGAGTTGGTTAACCTTGTGGTTGTGGCTGGAGATAGGAGGAAAGAGTCCAAGGACTTGGAAGAGAAAGCTGAAATGAAGAAAATGTATAGCCTGATCGAGACCTACAAGCTGAATGGCCAATTCAGATGGATTTCCTCTCAGATGAATAGAATAAGGAATGGTGAGCTGTACCGTGTGATCTGTGACACAAAGGGTGCTTTTGTGCAGCCTGCTGTGTACGAAGCTTTTGGTTTGACTGTTGTTGAGGCCATGACTTGTGGTTTGCCAACTTTTGCTACTTGCAATGGTGGTCCTGCTGAGATCATTGTGCATGGAAAATCTGGATACCACATTGATCCTTATCACGGTGACCGTGCTGCTGATCTTCTTGTTGAATTCTTTGAGAAGTCTAAAGCAGATCCATCTCACTGGGACACAATCTCTCACGGAGGCCTACAGCGTATTGAAGAGAAGTATACATGGCAAATTTACTCCGAGAGGCTTCTGACTCTCACGGGTGTCTATGGCTTCTGGAAGCATGTGTCTAACCTTGACCGCCGTGAGAGCCGCCGCTACCTTGAGATGTTCTATGCTCTCAAGTACCGCAAATTGGCTGAGTCAGTGCCCCTTGCTGTTGAAGAGTAA 2424 0.4517 MATTDRLTRVYSLRERIDETLSTNRNEILTLLSRIESKGKGLLQHHQIIAEFEEIPEDNRKKLSNGPFGEVLRSTQEAIVLAPWIALAVRPRPGIWEYLKVNVHALVAEELKAAEYLKFKEELVDGSSNGNFVLELDFEPFNASFPRPTLNKSIGNGVQFLNRHLSAKLFHDKESLHPLLEFLRSHSYNGKTLMLNGRIQTPDSLQNVLRKAEEYLSTLAPETPYSEFEHRFQEIGLERGWGDTAERVLEMIQLLLDLLEAPDPFTLETFIGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLKRIKQQGLDIVPRILIITRLLPEAVGTTCGQRLEKVYDTEHCHILRVPFRTENGIVRKWISRFEVWPYLETYTEDVAHELSKELQGRPDLIVGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPESDIYWKKFDEKYHFSSQFTADLFAMNHTDFIITSTFQEIAGNKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADQTIYFPYTETSRRLTSFHPEIEELLYSSVENEEHICVLKDRNKPIIFTMARLDRVKNITGLVEWYGKNARLRELVNLVVVAGDRRKESKDLEEKAEMKKMYSLIETYKLNGQFRWISSQMNRIRNGELYRVICDTKGAFVQPAVYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGYHIDPYHGDRAADLLVEFFEKSKADPSHWDTISHGGLQRIEEKYTWQIYSERLLTLTGVYGFWKHVSNLDRRESRRYLEMFYALKYRKLAESVPLAVEE 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1179 807 Gene3D - 26 146 - -
Lal19g1179 807 Gene3D - 147 276 - -
Lal19g1179 807 Gene3D Glycogen Phosphorylase B; 281 797 - -
Lal19g1179 807 PANTHER SUCROSE SYNTHASE 4 806 - -
Lal19g1179 807 Pfam Sucrose synthase 9 554 IPR000368 GO:0005985|GO:0016157
Lal19g1179 807 Pfam Glycosyl transferases group 1 565 730 IPR001296 GO:0016757
Lal19g1179 807 TIGRFAM sucr_synth: sucrose synthase 25 803 IPR012820 GO:0005985|GO:0016157
Lal19g1179 807 Gene3D Glycogen Phosphorylase B; 528 754 - -
Lal19g1179 807 PANTHER - 4 806 IPR012820 GO:0005985|GO:0016157
Lal19g1179 807 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 296 764 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1179 Lal-Chr19 15237463 15242575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1179 1 807 Glycosyltransferase AT3G43190 83.045 0.0 1415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1179 K00695 - gmx:100788584 1504.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1179 19 15237463 15242575 Lal19g1179 19 15237463 15242575 ECH
Lal14g1631 14 16699812 16705107 Lal19g1179 19 15237463 15242575 LSH
Lal7g1031 7 16466167 16476318 Lal19g1179 19 15237463 15242575 LSH
Lal19g1179 19 15237463 15242575 Lal4g1497 4 19122341 19128258 PCT
Lal4g1497 4 19122341 19128258 Lal19g1179 19 15237463 15242575 PCT