Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1481 ATGTTAGAGCATTGTGAAGTGAATCACAAAATGTTTTCTTCTTCACTTTCCTTCCTTCATTCTACAACTTCTCTCTCTTCTTCTTCCTTATTACTGCATAAACCTCACTCTTCAATTTCATGGCCAAATCCAAAATCTTCTTCATGTTTTGTGGTTGAAGCCAAAGCTAGTACCAGAAGAGAAGATAGAACTGCTCGTCACATTCGTATTAGGAAAAAGGTTGAAGGGACACCAGAAAGACCAAGGTTGTCCGTCTTCCGATCCAACAAGCATCTCTCTGTCCAAGTGATTGATGACACCAATATGCACACACTTGCTTCAGCTTCAACACTACAGAAGACAATTTTTGAAGAGTTCAACTACACCTCTGGTCCTACAATTGAAGTAGCGAAGAGGGTGGGCGAAATCATTGCAAAGTCATGTCTGGAGAAAGGAATAAAAAAGGTGGCCTTCGACCGTGGCGGGTACCCATACCATGGCCGCGTTCAAGCACTCGCCGATGCAGCTCGTGAACATGGCCTGGAATTCTAA 531 0.4331 MLEHCEVNHKMFSSSLSFLHSTTSLSSSSLLLHKPHSSISWPNPKSSSCFVVEAKASTRREDRTARHIRIRKKVEGTPERPRLSVFRSNKHLSVQVIDDTNMHTLASASTLQKTIFEEFNYTSGPTIEVAKRVGEIIAKSCLEKGIKKVAFDRGGYPYHGRVQALADAAREHGLEF 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1481 176 CDD Ribosomal_L18_L5e 70 174 - -
Lal4g1481 176 Hamap 50S ribosomal protein L18 [rplR]. 58 176 IPR004389 GO:0003735|GO:0005840|GO:0006412
Lal4g1481 176 Gene3D - 58 176 - -
Lal4g1481 176 TIGRFAM L18_bact: ribosomal protein uL18 60 176 IPR004389 GO:0003735|GO:0005840|GO:0006412
Lal4g1481 176 Pfam Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 58 176 IPR005484 GO:0003735|GO:0005840|GO:0006412
Lal4g1481 176 PANTHER 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL 17 176 IPR005484 GO:0003735|GO:0005840|GO:0006412
Lal4g1481 176 SUPERFAMILY Translational machinery components 59 174 - -
Lal4g1481 176 PANTHER 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL 17 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1481 Lal-Chr4 18941929 18945158 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1481 K02881 - gmx:100306308 233.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1459 17 15976971 15979769 Lal4g1481 4 18941929 18945158 LSH