Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1444 ATGTCAGGTTCCGATCCCAACAAGTTCATTACCAAAGCTGATAAGCTAACAACGCTGAGTCTCACACGGTGGAGTGCAGATTGGAAAAGTGCTACTGTTCTTTATGAACAAGCTGCTAATGCTTTTAGAGTTGCCAAGGACTATGAGAAAGCCAAAACAGCATATGAAAAAGCTTCAAAAGGACAAGAGATGCTTTCTTCGCCTTGGGATGCAGCTAAGCACATGGAATCTGCTGCTACTCAGGCAAAGGAACTAAGCAACTGGAAAGAAGTTGGGGACTTCTATCGAAGGGCATCTGAATTGTACATAGAGTGTGGGAGATCACAGCCTGCATCAGATGCTCTCGAAAAGGGAGCCCGTGCTTTGGCAGATACCTTGCCTGATGAAGCTATTCAGCTATATACAGATGCTTGTACAATTCTTGAAGATGACGACAAAGAACAGATGGCCTTCGATCTATATCGTGCTGCCGCTAGTGTTTATATAAAACTTGAAAAATATACTGATGCTGCATCTGTTCTGCTGAGATTGGGTTTGGCAGCTGACAAGTCTAATGCTACCAATAGCCAGTGCAAGGCTTATCTTAGCGCGATTATTGTCTATCTTTATGCTCATGACTTTAAGCAAGCAGAGAAGTGCTACAATGACTGCTATCAGATTGATGCATTTGTCAAAAGCGACCAGAATCGTTGTGCTAGCAAGCTTCTTGCTGCCTACACAGATGGAGACATTGAAGAAATCAAACGTATTGCACAATCCAGCGCCATTGCAAATCTCGACCATGTGATTATTAGGCTTGCGAGGAAACTTCCGACCGGCGATGTGAGTGCACTGAAGGAAGATACAGTTGAAGATGGAGAGGAGCCACTTGATGAAAATGACTTGACTTAA 891 0.4366 MSGSDPNKFITKADKLTTLSLTRWSADWKSATVLYEQAANAFRVAKDYEKAKTAYEKASKGQEMLSSPWDAAKHMESAATQAKELSNWKEVGDFYRRASELYIECGRSQPASDALEKGARALADTLPDEAIQLYTDACTILEDDDKEQMAFDLYRAAASVYIKLEKYTDAASVLLRLGLAADKSNATNSQCKAYLSAIIVYLYAHDFKQAEKCYNDCYQIDAFVKSDQNRCASKLLAAYTDGDIEEIKRIAQSSAIANLDHVIIRLARKLPTGDVSALKEDTVEDGEEPLDENDLT 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1444 296 Gene3D Tetratricopeptide repeat domain 3 272 IPR011990 GO:0005515
Lal4g1444 296 Pfam Soluble NSF attachment protein, SNAP 5 260 - -
Lal4g1444 296 PANTHER SOLUBLE NSF ATTACHMENT PROTEIN SNAP 4 284 IPR000744 GO:0006886
Lal4g1444 296 SUPERFAMILY TPR-like 7 249 IPR011990 GO:0005515
Lal4g1444 296 PANTHER GAMMA-SOLUBLE NSF ATTACHMENT PROTEIN 4 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1444 Lal-Chr4 18620158 18626776 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1444 K21198 - gmx:100790986 494.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1444 17 15846899 15851095 Lal4g1444 4 18620158 18626776 LSH