Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1444 ATGTCACGTTCTGATCCCAACAAGTTGATATCCAAAGCTGATAAATTAACAAGACTGAGTTTCACGCGATGGAGTACAGATTGGAAAAGTGCTACTGTTCTTTATGAGCAGGCTGCTAATGCTTTTAGAGTTGCCAAGGACTATGAGAAAGCCAAAACAGCATATGAGAAAGCTTCGAAAGGACAAGAGATGCTTTCTTCACCATGGGATGCAGCTAAGCACATGGAATCTGCTGCTACTCAGGCAAAGGAACTAAGCAACTGGAAAGAAGTTGGGGACTTCTATCGAAGGGCATCTGAGTTGTACATAGAGTGTGGGAGATCACAGCCCGCGTCAGATGCTCTTGAAAAGGGAGCCCGTGCTTTGGCGGATACCATGCCTGATGAAGCTGTTCAGCTATATTCAGATGCTTGTACAATTCTTGAAGATGATGAAAGAGATCAAATGGCCTTTGATTTATACCGTGCTGCTGCTAGTATTTATATAAAACTTGAGAAATATACAGATGCTGTATCTTTCCTAATGAGACTGGGCTTGGCTGCTGAAAAATGTAATGCTACCAATAGCCAGTGCAAGGCTTATCTTAGTGCGATTATCATCTACCTTTATGCTCATGACTTTAAGCAAGCAGAGAAGTGCTACAATGACTGCTATCAGATTGATGCCTTTGTGAAAAGTGACCAGAACCGTTGCGCTAGCAAGCTTCTTGCTGCGTACACGGACGGAGACATTGAAGAAATCAAGCATGTTACTCATTCCAGCGCTATTGCAAACCTTGAGAATGTGATTATTAAGCTTGCAAGGAAACTTCCCACTGGTGATGTCAGTGCATTGAAGGCAGATACTATTGAAGATGGAGAGGAGCCACTAGATGAAAATGATTTGACTTAA 891 0.4254 MSRSDPNKLISKADKLTRLSFTRWSTDWKSATVLYEQAANAFRVAKDYEKAKTAYEKASKGQEMLSSPWDAAKHMESAATQAKELSNWKEVGDFYRRASELYIECGRSQPASDALEKGARALADTMPDEAVQLYSDACTILEDDERDQMAFDLYRAAASIYIKLEKYTDAVSFLMRLGLAAEKCNATNSQCKAYLSAIIIYLYAHDFKQAEKCYNDCYQIDAFVKSDQNRCASKLLAAYTDGDIEEIKHVTHSSAIANLENVIIKLARKLPTGDVSALKADTIEDGEEPLDENDLT 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1444 296 PANTHER SOLUBLE NSF ATTACHMENT PROTEIN SNAP 3 280 IPR000744 GO:0006886
Lal17g1444 296 PANTHER GAMMA-SOLUBLE NSF ATTACHMENT PROTEIN 3 280 - -
Lal17g1444 296 SUPERFAMILY TPR-like 7 249 IPR011990 GO:0005515
Lal17g1444 296 Gene3D Tetratricopeptide repeat domain 2 272 IPR011990 GO:0005515
Lal17g1444 296 Pfam Soluble NSF attachment protein, SNAP 5 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1444 Lal-Chr17 15846899 15851095 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1444 K21198 - gmx:100790986 488.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1444 17 15846899 15851095 Lal4g1444 4 18620158 18626776 LSH