Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1397 ATGGAATCAAAGAGTTTAAACCAAGCTCCAGTTTTGACACTTTTCCCATGTCTGAAACCCCCTAACAAAACCCTACTCTTCCATCAAATATGTGTTCTTGTTATCACATTTCTTGCATATGCTTCTTTCCATGCCTCTAAGAAGCCTCCTAGCATTGTTAAAAGTGTTATGGGACCCACAGTTCCATCCAATTCAACTCAAGTTCCCAACTTGAGTGATGCAGGTTGGCCTCCCTTTAATGGAACCCGGGGCACTCACCTGCTCGGCGAGGTCGATCTTGCATTCCTTACTGCATATGCAATCGGCATGTATTTCGCTGGTCATGTTGGCGATCGAATTGATTTGAGGTTGTTCCTTGTGTTTGGTATGATGGGGAGTGGTGTTTTTACCATACTTTTCGGGTTAGGGTATTGGTTAGATGTCCATGTGTTGGGATATTTTGTTGCTGTTCAGATTGTTTGTGGAGTGTTTCAGTCAATTGGGTGGCCTTGTGTGGTTGCAATTGTCGGGAATTGGCTCGGGGAATCAAAGAGGGGCTTAATAATGGGGGTATGGAATTCACATACCCCGGTGGGGAATATCATTGGTTCGATTATAGCTTCTGGGGTTCTGGAATATGGATGGGGTTGGTCATTTGTGGTGCCTGGACTACTGATCATTTTCGTGGGGATTTTCGTGTTTTTATTTCTTGTTGTGACTCCGGAGCATATGGGATTTCTACATCCTGGAACGGAGATTGAAATGAGTATGGAAACGGAAAATGTAGAGAACGTTCGGAATGTGGAATCAGAGGAATCAAACCTTATTGAATCTGATCATTCAGATTCTTCATCTGCAATTGGGTTTTTAGAGGCATGGAAGTTACCAGGAGTGGCTCCATTTGCTTTCTGTCTCTTTTTCTCAAAGCTTGTGGCTTACACTTTTTTGTATTGGCTACCCTTCTACATAAGGCACACGGCTGTTGCGGGTGTGCATATATCTCACAAAACCGCTGGATTACTTTCAACAATATTTGATATTGGGGGAGTCCTTGGTGGAATTGCAGCGGGTTTCATTTCTGATATGATTGAAGCCAGTGCTATTACTTCAATTCTATTCTTGTTTCTATCAATTCCGTCTCTTGTTTTGTATCGTGTTTTTGGGAGCCTCTCTATGTTGACCAACATTGCTTTAATGTTTCTTTCGGGATTTTTGGTGAACGGTCCATACTCACTAATCACAACTGCTGTAGCTGCTGATCTTGGTACGCAGAGCTTGAACGGTGGAAATTCTCGGGCGCTGGCTACTGTGACTGCAATAATAGACGGTACCGGTTCTATTGGAGCAGCTCTCGGGCCACTTTTGGCCGGGTATATTTCAACAAGGGGGTGGAACAGTGTCTTTTTTATGCTCATTCTGTCAATTTTCTTCGCTGGTTTATGCTTGATTCGTATAGCTAGAACTGAGATACAAGAGAAGCTTGCAGGAAAATAA 1473 0.4325 MESKSLNQAPVLTLFPCLKPPNKTLLFHQICVLVITFLAYASFHASKKPPSIVKSVMGPTVPSNSTQVPNLSDAGWPPFNGTRGTHLLGEVDLAFLTAYAIGMYFAGHVGDRIDLRLFLVFGMMGSGVFTILFGLGYWLDVHVLGYFVAVQIVCGVFQSIGWPCVVAIVGNWLGESKRGLIMGVWNSHTPVGNIIGSIIASGVLEYGWGWSFVVPGLLIIFVGIFVFLFLVVTPEHMGFLHPGTEIEMSMETENVENVRNVESEESNLIESDHSDSSSAIGFLEAWKLPGVAPFAFCLFFSKLVAYTFLYWLPFYIRHTAVAGVHISHKTAGLLSTIFDIGGVLGGIAAGFISDMIEASAITSILFLFLSIPSLVLYRVFGSLSMLTNIALMFLSGFLVNGPYSLITTAVAADLGTQSLNGGNSRALATVTAIIDGTGSIGAALGPLLAGYISTRGWNSVFFMLILSIFFAGLCLIRIARTEIQEKLAGK 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1397 490 Gene3D MFS general substrate transporter like domains 286 488 IPR036259 -
Lal4g1397 490 ProSiteProfiles Major facilitator superfamily (MFS) profile. 34 484 IPR020846 GO:0022857
Lal4g1397 490 PANTHER MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B 3 488 - -
Lal4g1397 490 SUPERFAMILY MFS general substrate transporter 88 480 IPR036259 -
Lal4g1397 490 Gene3D MFS general substrate transporter like domains 23 242 IPR036259 -
Lal4g1397 490 Pfam Major Facilitator Superfamily 88 414 IPR011701 GO:0022857|GO:0055085
Lal4g1397 490 PIRSF Hexose_phosphate_transp 20 489 IPR000849 GO:0016021|GO:0022857|GO:0055085
Lal4g1397 490 PANTHER GLYCEROL-3-PHOSPHATE TRANSPORTER 5-RELATED 3 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1397 Lal-Chr4 18197741 18199983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1397 1 490 Organic Solute Cotransporters AT2G13100 69.980 0.0 688
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1397 K13783 - gmx:100813689 839.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1397 4 18197741 18199983 Lal4g1397 4 18197741 18199983 ECH
Lal17g1382 17 15220320 15222749 Lal4g1397 4 18197741 18199983 LSH