Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1382 ATGCAATCTAAGAGTTTGAGCCAAGCTCCAGCTCTGAAACTCTTCCCAGGCCTGAAACCCCCTAACAAAACCCTAATCTTCCATCAAATATGTGTTCTTTCTATCACATTTCTTGCATATGCTTCTTTCCATGCATCTAGGAAGCCTTCTAGTATTGTTAAGAGTGTCCTGGGACCCACAATTCCATCTAATTCAACTCAAGATCCCAACTTCAGTACTTCCAAGGATGCAGGTTGGCCCCCTTTTAATGGAACCCGGGGCACTCAACGGCTCGGTGAGGTTGATCTTGCATTCCTTACTTCCTATGCCATTGGCATGTATTTCGCAGGTACAGTTGGTGATCGGGTTGATTTGAGGTTGTTCCTTGTGTTTGGGATGGTGGGGAGTGGTGTTTTTACAGTACTTTTCGGGTTAGGGTATTGGTTAGATGTTCATGTGTTGGGATATTTTGTTTGCATTCAGGTTGTTTGTGGAGTGTTTCAGTCAATTGGGTGGCCTTGTGTGGTTGCAATTGTGGGGAATTGGCTTGGGGAGTCGAAGAGGGGCCTGATAATGGGGGCATGGAATTCGAATACATCGGTAGGGAATATCATTGGTTCGGTTGTTGCCTCGGGGGTTCTTGAATTTGGATGGGGTTGGTCATTCGTGGTGCCCGGACTACTAATCATTTTGGTGGGGATTTTGGTGTTTTTGTTTCTGGTTGTGAATCCAGAGGATATGGGATTTGTGCATCCTGGAATGGAGACGGAAATGAGTGTGGAAACAGGAAGTGTAGGGAATCTTCATAATGTGGAATCAGAGGAATCAAAGCTTATTGAGTCTGATCATTCAGATTCTTCTGCAATCGGGTTTATAGAGGCGTGGAAGTTACCGGGAGTAGCTCCATTTGCTTTCTGTCTCTTTTTCTCAAAGCTTGTAGCTTACACATTTTTGTATTGGTTGCCCTTCTACATAAGGCACACAGCTGTTGCGGGTGTGCATATATCTCACAAAACTGCTGGATTACTTTCAACAATATTTGATATCGGGGGAGTCCTTGGTGGAATTACAGCAGGTTTCATTTCTGATATCATTGAAGCGCGTGCTATTACATCAATACTGTTCTTGTTTCTATCAATTCCGGCTCTTGTTTCGTATCGTGTTTTTGGGAGCCTCTCTAAGTTGGCCAACATTGCTTTATTGTTTCTTTCGGGATTTTTGGTTAACGGTCCATACTCTCTAATCACAACTGCTGTGGCTGCTGATCTTGGTACGCAGGGCTTGAATGGTGGGAATTCTCGGGCCCTGGCTACTGTGACTGCAATCATAGATGGTACTGGTTCTGTTGGAGCTGCTCTTGGACCACTTTTGGCTGGGTATATTTCAACCAGGGGATGGAACAGTGTCTTCTTTATGCTCATTCTGTCTATTTTCTTTGCTGGTTTATTCTTGATTCGTCTTGCAAGAACTGAGATACAAGAGAAGCTGAAAAACACTTCTGATACATAG 1488 0.4409 MQSKSLSQAPALKLFPGLKPPNKTLIFHQICVLSITFLAYASFHASRKPSSIVKSVLGPTIPSNSTQDPNFSTSKDAGWPPFNGTRGTQRLGEVDLAFLTSYAIGMYFAGTVGDRVDLRLFLVFGMVGSGVFTVLFGLGYWLDVHVLGYFVCIQVVCGVFQSIGWPCVVAIVGNWLGESKRGLIMGAWNSNTSVGNIIGSVVASGVLEFGWGWSFVVPGLLIILVGILVFLFLVVNPEDMGFVHPGMETEMSVETGSVGNLHNVESEESKLIESDHSDSSAIGFIEAWKLPGVAPFAFCLFFSKLVAYTFLYWLPFYIRHTAVAGVHISHKTAGLLSTIFDIGGVLGGITAGFISDIIEARAITSILFLFLSIPALVSYRVFGSLSKLANIALLFLSGFLVNGPYSLITTAVAADLGTQGLNGGNSRALATVTAIIDGTGSVGAALGPLLAGYISTRGWNSVFFMLILSIFFAGLFLIRLARTEIQEKLKNTSDT 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1382 495 PANTHER GLYCEROL-3-PHOSPHATE TRANSPORTER 5-RELATED 3 492 - -
Lal17g1382 495 Gene3D MFS general substrate transporter like domains 288 494 IPR036259 -
Lal17g1382 495 PANTHER MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B 3 492 - -
Lal17g1382 495 PIRSF Hexose_phosphate_transp 22 495 IPR000849 GO:0016021|GO:0022857|GO:0055085
Lal17g1382 495 SUPERFAMILY MFS general substrate transporter 91 482 IPR036259 -
Lal17g1382 495 Pfam Major Facilitator Superfamily 53 416 IPR011701 GO:0022857|GO:0055085
Lal17g1382 495 Gene3D MFS general substrate transporter like domains 25 245 IPR036259 -
Lal17g1382 495 ProSiteProfiles Major facilitator superfamily (MFS) profile. 34 486 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1382 Lal-Chr17 15220320 15222749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1382 1 486 Organic Solute Cotransporters AT2G13100 70.082 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1382 K13783 - gmx:100813689 847.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1382 17 15220320 15222749 Lal17g1382 17 15220320 15222749 ECH
Lal17g1382 17 15220320 15222749 Lal4g1397 4 18197741 18199983 LSH