Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1149 ATGGGTTCTATGCTGAGTTCAAAGAAGAGCAAGGAAGAAATTGAAATGGCATTGAATAAAGCAAAGGAAATTGCATCTTCCTCCCCAGTTGTTGTTTTCAGTAAGACATACTGTGGTTACTGTAAGAGAGTTAAGGATCTTCTCACACAGCTAGGGGCAGCATACAAGGTCATTGAATTGGATGAGGAAAGTGATGGAGGTGACATTCAATCAGCTCTAGCTGAGTGGACTGGGCTTAGGACTGTGCCTAATGTGTTTATTGGTGGAAAGCACATTGGTGGTTGTGACACTGTTATGGAGAAACACCGGGCAGGTCAACTAGTTCCCCTTCTCAATGATGCTGGAGCTATAGTTAGTAACGCAGTTCAGCTGTGA 375 0.4373 MGSMLSSKKSKEEIEMALNKAKEIASSSPVVVFSKTYCGYCKRVKDLLTQLGAAYKVIELDEESDGGDIQSALAEWTGLRTVPNVFIGGKHIGGCDTVMEKHRAGQLVPLLNDAGAIVSNAVQL 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1149 124 Pfam Glutaredoxin 30 92 IPR002109 -
Lal4g1149 124 PANTHER GLUTAREDOXIN-C1 1 124 - -
Lal4g1149 124 Gene3D Glutaredoxin 9 124 - -
Lal4g1149 124 ProSitePatterns Thioredoxin family active site. 30 48 IPR017937 -
Lal4g1149 124 CDD GRX_GRXh_1_2_like 29 110 - -
Lal4g1149 124 PRINTS Glutaredoxin signature 30 48 IPR014025 -
Lal4g1149 124 PRINTS Glutaredoxin signature 75 88 IPR014025 -
Lal4g1149 124 PRINTS Glutaredoxin signature 89 102 IPR014025 -
Lal4g1149 124 SUPERFAMILY Thioredoxin-like 19 117 IPR036249 -
Lal4g1149 124 TIGRFAM GRX_euk: glutaredoxin 30 110 IPR011899 -
Lal4g1149 124 ProSiteProfiles Glutaredoxin domain profile. 18 118 - -
Lal4g1149 124 PANTHER GLUTAREDOXIN 2 1 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1149 Lal-Chr4 14924879 14929098 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1149 18 117 Miscellaneous Gene Families AT4G15700 41.000 1.42e-19 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1149 K03676 - qsu:111991481 211.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1149 4 14924879 14929098 Lal21g0736 21 6057528 6069593 ECH
Lal4g1149 4 14924879 14929098 Lal4g1149 4 14924879 14929098 ECH
Lal21g0736 21 6057528 6069593 Lal4g1149 4 14924879 14929098 LSH