Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0736 ATGGGTTCTGTGATGAGTTCAAAGAAGAGTAAGGAAGAGCTTGAAATGGCATTGAATAAGGCAAAGGAGATAGCATCTTCATCCTCTGTTGTAGTCTTTAGTAAAACTTACTGTGGTTACTGCAAGAGGGTGAAGAATCTTCTAACACAGCTAGCAGCAGCTTACAAAGTCATTGAATTGGATGAGGAAAGTGATGGACGTGATATTCAGTTAGCTCTAGCTGAGTGGACAGGGCTTAGGACTGTGCCTAATGTGTTTATTGGAGGAAAGCACATTGTGGTTTTGGAGAAACACAGAGCAGGTCAATTGGTTCCTCTTCTCAATGATGCTGGGGCGATTGCCAGTAACTCAGCTCAGCTATGA 363 0.4298 MGSVMSSKKSKEELEMALNKAKEIASSSSVVVFSKTYCGYCKRVKNLLTQLAAAYKVIELDEESDGRDIQLALAEWTGLRTVPNVFIGGKHIVVLEKHRAGQLVPLLNDAGAIASNSAQL 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0736 120 PANTHER GLUTAREDOXIN-C1 1 120 - -
Lal21g0736 120 ProSitePatterns Thioredoxin family active site. 30 48 IPR017937 -
Lal21g0736 120 PRINTS Glutaredoxin signature 30 48 IPR014025 -
Lal21g0736 120 PRINTS Glutaredoxin signature 75 88 IPR014025 -
Lal21g0736 120 SUPERFAMILY Thioredoxin-like 19 113 IPR036249 -
Lal21g0736 120 CDD GRX_GRXh_1_2_like 35 106 - -
Lal21g0736 120 PANTHER GLUTAREDOXIN 2 1 120 - -
Lal21g0736 120 Pfam Glutaredoxin 30 92 IPR002109 -
Lal21g0736 120 ProSiteProfiles Glutaredoxin domain profile. 18 114 - -
Lal21g0736 120 Gene3D Glutaredoxin 9 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0736 Lal-Chr21 6057528 6069593 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0736 22 113 Miscellaneous Gene Families AT4G15700 39.583 7.31e-15 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0736 K03676 - qsu:111991481 190.274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1149 4 14924879 14929098 Lal21g0736 21 6057528 6069593 ECH
Lal21g0736 21 6057528 6069593 Lal21g0736 21 6057528 6069593 ECH
Lal21g0736 21 6057528 6069593 Lal4g1149 4 14924879 14929098 LSH