Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0735 ATGGCACCAACTTTACCTATAGAGTTTGTTGGACAAAAGGAATCCATTAAATACTCTCATTCACAAGTTATGGGAAAGTCTAGGAAGTACTCTAAAGGTTATGCTACTGGTTTTGTTCCTGATTTTCGTCACGCTGTAGAGACTGTGGGTGAATCAGAAGGGTTAGGTAGCTCAGGTAGGATTGATACAGAGATGACAGCATCGGCCAATTCATTCGCGCCGAGGAGGAAAAGTGTTAATGGTAGTTTTGATGTACCTTTGCAGCTTTTTATGTTGTCGAAGATGTCTGGTTCCGAGAAAAAGGATTTGAAAATGAGGTTAAGTTGGGAACTTGAAAGAGTGAGAGAACTTAAGAAGAAAGTTGACAGTGTGAATTCAAACATGAGTATGTTATCTCCCTCTAGTGACATCAGGAGCGGCGATGTGGGACAGAAGAGGCCTCAGTTGGAGAGCGAGCAGCACAGAACAATGGAAGCATCAGTGCCACATGCCAAGAAAAGGCCCTTCCCGGGACGTAGTGGTCCGAAGCCCAAGAAAAGCACATCTGGTTGTTTTGAATATGTGAAACCTGCTGCACCAGTGAGTTCTTCCAATGCTACATTGTTGAAATCGTGTGAGACATTACTTAACCGTTTGATGACTCATCAGTATGGTTGGGTTTTTAACACTCCAGTTGATGTTGTTAAATTGAACATTCCGGATTATTTCAAAGTCATCAAACATCCAATGGATTTGGGTACTGTGAAGAGTAGAATAACTTCAGGTGAATATTCAAATCCTATGGATTTTGCTGCAGATGTGCGGCTAACGTTTTCAAATGCCATGACTTATAATCCACCCGGCAATGATGTACACATCATGGCAGATAATCTTAGTAAATTTTTTGGAACTAGATGGAAGCCAATAGAGAAGAAGATTCTTGCCACTGGTAGTCAATCTGAGCCTTCAAGACCAATAACTACCTTCATTGAAACTAAAATTACTGACCCGAATCCTCCCCCCAAAAAAAATAAAATAACACCACATAAAACTAATATCATGCCAGAGCCTGTTATAAGAACCATGACTGGTGAGGAGAGGCATAAATTGAGTGTGGAGTTGGAGGCGATGCTTGGAGAGTTGCCTGAAAGCATTATTGATTTCTTGAAAGAGCATAGTCGTGATGCTGGGCAAACTGATGATGATGAAATTGAGATTGATATTGATGCTCTTAGTGATGATACCTTATTCAATTTGCGGAAGCTTCTTGATGACTATATACTGGAGAAGCAAAAATTCAAGTCAAAATCTGGACCATGTGAAATTGAGCCTGTGAATGAATCAGGGTTTAGCAATCCATCAATTCAGCCATGTAAAGACATTGAACAAGTTGAGGAGGATGTCGACATTGTTGGTGGTAATGATCCCCCTGTTTCAAATTATCCCCCAGTTGAAATTGAGAAAGATGGTGTCAACAGAAACAATAAATGCAGTAGTGAATCTGGCTCTTCATCCAGTGGTTCGTGTACTGCATAG 1515 0.4079 MAPTLPIEFVGQKESIKYSHSQVMGKSRKYSKGYATGFVPDFRHAVETVGESEGLGSSGRIDTEMTASANSFAPRRKSVNGSFDVPLQLFMLSKMSGSEKKDLKMRLSWELERVRELKKKVDSVNSNMSMLSPSSDIRSGDVGQKRPQLESEQHRTMEASVPHAKKRPFPGRSGPKPKKSTSGCFEYVKPAAPVSSSNATLLKSCETLLNRLMTHQYGWVFNTPVDVVKLNIPDYFKVIKHPMDLGTVKSRITSGEYSNPMDFAADVRLTFSNAMTYNPPGNDVHIMADNLSKFFGTRWKPIEKKILATGSQSEPSRPITTFIETKITDPNPPPKKNKITPHKTNIMPEPVIRTMTGEERHKLSVELEAMLGELPESIIDFLKEHSRDAGQTDDDEIEIDIDALSDDTLFNLRKLLDDYILEKQKFKSKSGPCEIEPVNESGFSNPSIQPCKDIEQVEEDVDIVGGNDPPVSNYPPVEIEKDGVNRNNKCSSESGSSSSGSCTA 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0735 504 Gene3D - 187 314 IPR036427 GO:0005515
Lal4g0735 504 Gene3D - 349 426 IPR038336 -
Lal4g0735 504 MobiDBLite consensus disorder prediction 126 141 - -
Lal4g0735 504 ProSiteProfiles NET domain profile. 345 427 IPR027353 -
Lal4g0735 504 PANTHER TRANSCRIPTION FACTOR GTE8 25 501 - -
Lal4g0735 504 MobiDBLite consensus disorder prediction 126 181 - -
Lal4g0735 504 SUPERFAMILY Bromodomain 201 305 IPR036427 GO:0005515
Lal4g0735 504 MobiDBLite consensus disorder prediction 143 162 - -
Lal4g0735 504 MobiDBLite consensus disorder prediction 430 504 - -
Lal4g0735 504 Pfam Bromodomain extra-terminal - transcription regulation 355 417 IPR027353 -
Lal4g0735 504 PRINTS Bromodomain signature 216 229 IPR001487 GO:0005515
Lal4g0735 504 PRINTS Bromodomain signature 232 248 IPR001487 GO:0005515
Lal4g0735 504 PRINTS Bromodomain signature 248 266 IPR001487 GO:0005515
Lal4g0735 504 PRINTS Bromodomain signature 266 285 IPR001487 GO:0005515
Lal4g0735 504 MobiDBLite consensus disorder prediction 488 504 - -
Lal4g0735 504 Pfam Bromodomain 205 288 IPR001487 GO:0005515
Lal4g0735 504 SMART bromo_6 194 304 IPR001487 GO:0005515
Lal4g0735 504 ProSiteProfiles Bromodomain profile. 213 285 IPR001487 GO:0005515
Lal4g0735 504 PANTHER TRANSCRIPTION FACTOR GTE10 25 501 - -
Lal4g0735 504 CDD Bromo_plant1 201 299 IPR037377 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0735 Lal-Chr4 6121800 6130352 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0735 - - gmx:100776368 696.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0735 4 6121800 6130352 Lal21g0770 21 6473476 6479669 ECH
Lal4g0735 4 6121800 6130352 Lal4g0735 4 6121800 6130352 ECH
Lal21g0770 21 6473476 6479669 Lal4g0735 4 6121800 6130352 LSH