Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0770 ATGGCACCAACTCTACCTATAGAATTTGCTGGGCAAAAGGAATCCAGAAAATACTCTCATTCACAAGTTATGGGCAAGTCTAGGAAGTATTCTAAAGGTTATGCTACTGGTTTTGTTCCCGATTTTCGTCATGCTGTAGAAACTGTAGGTGAATCTGAAGGGTTAGGTAGCTCAGGTAGAGTTGATAATGAGATAACAGCATCAGTGGATTCATTTGTGCCAAAGAGGAAATGCGCTAATGGTAGTTTTGATGTTCCATATCAGTTTTTCTTGTTGTCGAGGATGTCTGGTTCAGAGAAAAAGGATTTGAAAATGAGGTTTAGTTGTGAACTTGAAAAAGTGAGAGAACTTCAGAAGAAAGTTGAAAGTTGGAATCTGAACGTTATTGCACTGTCCCCTTCTAGTGATAAAAGGAGTGGCAGTGTAGGACAGAAGAGGCCTCAGTTAGAGAGTCAGCAGCACAGAACAATGGAAGCATCAGTACCACATGGCAAGAAAAGGCCCTTTCCCGGGCGCAGTGGTCCGAAGCCCAAGAAAAGCACGTCTGGTCATCTTGATTATGTGAAACCTGCAGCACCAGTGAGTTCTTCATATGCTGCATTGTTGAAATCGTGCGAGACGTTACTTAGCCGTTTGATGACCCATCAATATGGTTGGGTTTTTAACACACCAGTTGACGTTGTTAAATTGAACATTCCAGATTATTTCAATGTCATCAAACATCCGATGGATTTGGGCACTGTGAAGAGTAGAGTAACTTCAAGTGAATATTCGAACCCTATGGATTTTGCTGCAGACGTGCGGCTAACATTTTCAAATGCCATGACTTATAATCCACCAGGGAATGATGTACACATCATGGCAGATAATCTTAGTAAATTTTTTGAAACTAGATGGAAACCTATAGAAAAGAAGGTTCTTGCCATTGGTAGTCAATCTGTGCCTTCGAGACCAACACCTACTTTCATCGAAACTAATATCAAATCTGAGCCTGTTAAAAGAATCATTACTGCTGAGGAGAGGCATAAATTGAGTGTGGAGTTGGAGGCTATGCTTGGAGAGCTGCCTGAAAGAATTATTGATTTCTTGAAAGAGCAGAGTTGTGATGGTGGGCAAACAGATGAGGAAGAAATTGAGATTGATATTGATGCTCTTAGTGATGACACATTATTCAAATTACGGAAGCTTCTCGATGACTATATACTGGAAAAGCAGAAAGTTCAGTCAAAATCTGGACCATGTGAAGTAGAGCTTGTGAATGAATCAGGATTTAGCAAATCATCAATGCAGCCATGTAAAGGCAACGAACACGTTGAGGAAGATGTGGACATCGTTGGTGGTAATGATCCTCCTGTTTCAAATTATCCCCCAGTAGAGATTGAGAAAGATGGTGCCAACAGAAACAGTAAATGCAGTAGTTCTAGTAGCTCCAGTAGTGAATCTGGCACTTCATCCAGCGATTCAGACTCGGGTAGTTCATCCGGTAGTGAGTTAGACACCACTAAAGCATCTGAACCTCCTAGCGCTACCAAGGAAAATATAGGATCTGGCTTAACTTCAGATCAGAACAGAGGGGATCCTCCCAGTAAATCCAAAACTGTAAAGGACTCAATGGCTGTGGGTGGCCAAATTGAGCAGAGTTCCCAGACTCAGCCAGTTACTATTGAGCAAGAAAGCCATCAAGAGGGGGAGAGCGCTCCATCTCAGAGGCAAGTCTCTCCTGAAAAGCTCTACCGCGCAGCTTTATTAAGGAACCGGTTTGCTGACACCATACTTAAGGCTCAGGAGAAAACCCTTGAAAAGGATGAAAAGCGGGATCCTGAAAAACTTAGGATGGAGCGAGAAGATCTTGAAAGGCGGCATAAGGAAGAGAAAGCTCGGTTACAGGCAGAGGCAAAAGCTGCAGAAGAAGCCCAGAGAAGAGCTGAAGCAGAAGCTGCAGCTGAAGCTAAAAGGAAGAGAGAACTGGAGAGAGAAGCAGCACGTCTGGCTTTGCAAAAGATGGAGAAAACTGTTGACATCAATGAGAGTAGTCAATTTTTGGAAGATCTAGAGATGCTGAGTTCAGTACATGGTGAGCATTTACCAATTTCCAAGGAGATAAGCCCAGATCATCTTCAAAAATTGGGTAGTTTCAACCTACCGGGAAATCCGTTAGAACAGCTAGGACTCTACATGAAGGCTGATGATGAGGAAGAGGATGAAGAATTGCCTCCAAGTACTGCAGCAGGGCCATCAAATGATGTAGAAGAAGGAGAAATTGATTGA 2268 0.4277 MAPTLPIEFAGQKESRKYSHSQVMGKSRKYSKGYATGFVPDFRHAVETVGESEGLGSSGRVDNEITASVDSFVPKRKCANGSFDVPYQFFLLSRMSGSEKKDLKMRFSCELEKVRELQKKVESWNLNVIALSPSSDKRSGSVGQKRPQLESQQHRTMEASVPHGKKRPFPGRSGPKPKKSTSGHLDYVKPAAPVSSSYAALLKSCETLLSRLMTHQYGWVFNTPVDVVKLNIPDYFNVIKHPMDLGTVKSRVTSSEYSNPMDFAADVRLTFSNAMTYNPPGNDVHIMADNLSKFFETRWKPIEKKVLAIGSQSVPSRPTPTFIETNIKSEPVKRIITAEERHKLSVELEAMLGELPERIIDFLKEQSCDGGQTDEEEIEIDIDALSDDTLFKLRKLLDDYILEKQKVQSKSGPCEVELVNESGFSKSSMQPCKGNEHVEEDVDIVGGNDPPVSNYPPVEIEKDGANRNSKCSSSSSSSSESGTSSSDSDSGSSSGSELDTTKASEPPSATKENIGSGLTSDQNRGDPPSKSKTVKDSMAVGGQIEQSSQTQPVTIEQESHQEGESAPSQRQVSPEKLYRAALLRNRFADTILKAQEKTLEKDEKRDPEKLRMEREDLERRHKEEKARLQAEAKAAEEAQRRAEAEAAAEAKRKRELEREAARLALQKMEKTVDINESSQFLEDLEMLSSVHGEHLPISKEISPDHLQKLGSFNLPGNPLEQLGLYMKADDEEEDEELPPSTAAGPSNDVEEGEID 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0770 755 PANTHER TRANSCRIPTION FACTOR GTE10 25 745 - -
Lal21g0770 755 Gene3D - 329 408 IPR038336 -
Lal21g0770 755 ProSiteProfiles NET domain profile. 326 408 IPR027353 -
Lal21g0770 755 PANTHER TRANSCRIPTION FACTOR GTE8 25 745 - -
Lal21g0770 755 MobiDBLite consensus disorder prediction 540 572 - -
Lal21g0770 755 MobiDBLite consensus disorder prediction 135 158 - -
Lal21g0770 755 Gene3D - 189 313 IPR036427 GO:0005515
Lal21g0770 755 MobiDBLite consensus disorder prediction 135 185 - -
Lal21g0770 755 PRINTS Bromodomain signature 216 229 IPR001487 GO:0005515
Lal21g0770 755 PRINTS Bromodomain signature 232 248 IPR001487 GO:0005515
Lal21g0770 755 PRINTS Bromodomain signature 248 266 IPR001487 GO:0005515
Lal21g0770 755 PRINTS Bromodomain signature 266 285 IPR001487 GO:0005515
Lal21g0770 755 SUPERFAMILY Bromodomain 188 305 IPR036427 GO:0005515
Lal21g0770 755 SMART bromo_6 194 304 IPR001487 GO:0005515
Lal21g0770 755 MobiDBLite consensus disorder prediction 442 575 - -
Lal21g0770 755 MobiDBLite consensus disorder prediction 723 755 - -
Lal21g0770 755 Pfam Bromodomain extra-terminal - transcription regulation 336 398 IPR027353 -
Lal21g0770 755 MobiDBLite consensus disorder prediction 595 654 - -
Lal21g0770 755 ProSiteProfiles Bromodomain profile. 213 285 IPR001487 GO:0005515
Lal21g0770 755 MobiDBLite consensus disorder prediction 467 527 - -
Lal21g0770 755 Pfam Bromodomain 205 288 IPR001487 GO:0005515
Lal21g0770 755 Coils Coil 614 673 - -
Lal21g0770 755 CDD Bromo_plant1 201 299 IPR037377 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0770 Lal-Chr21 6473476 6479669 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0770 - - gmx:100776368 980.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0735 4 6121800 6130352 Lal21g0770 21 6473476 6479669 ECH
Lal21g0770 21 6473476 6479669 Lal21g0770 21 6473476 6479669 ECH
Lal21g0770 21 6473476 6479669 Lal4g0735 4 6121800 6130352 LSH