Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0722 ATGAGAAGACCATTGAAACAACCTCAGAAACGCATCACCGACAACCATGATTTTTTCGATGATTTACCTGATGATCTTGTTGTCTTCATTCTCTCCAAACTCAGCTCCACCGCTTCTTCTCCCTCTGAATTCATTAACATTCTCTCAACATGCAAGAGATTGAACCGTTTAGGTTTACATCGTATGGTATTATCGAAAGCTGGTCCTAAAGTGTTTGTTATTAAGGCCAAAAATTGGTCAGAACATGCTCATCGTTTTCTTAAACACTGCGTTAACGCCGCCAACCTCGACGCTTGTTACACTCTTGGAATGATCCGGTTTTACTGTCTAAAAAACAGAGCGAGTGGGCTTTCTTTAATGGCGAAGGCGGCGATGAAATCTCACGCGCCGGCGTTGTACTCTCTAGGTGTGATACAGTTCAACGGAAGCGGAGGCACGAAGCAGGACAAGGACTTAAGAGCCGGGGTAGCTCTCTGCGCGCGTGCGTCGCTTCTCGGCCACATCGACGCGCTTCGCGAGTTAGGTCACTGCCTCCATGACGGTTACGGCGTGAAGAAGAATCTCTCAGAGGGTCGCCGGTTACTAGTACAAGCCAACGCCCGAGAGCTCGCGTTCGTCATACGCTCTGTGACAAGCGCGTCACCATCTGTTCCGTCCTCATCGCTGACGTGGCGTGCGGGTGATTATTCGGTGTGTCCGTTACTGAGTGATTACGTGTACAACGTGGCGGTTCCAGAGGTTCAGCCCGTGGGCTCTTTCATGAGGGAGTGGTTTGAGAGTGGCCCGGGCCGGGTTGAATTGGTTAACGGATTGAGACTTTGTGGTCACATTGGGTGTGGGCGGGCCGAGACCCGGGCCCACGAGTTTAGGAGATGTTCGGTGTGTGGTAAAGTGAACTATTGCTCACGTGGGTGTCAGGCCTTGGATTGGAAGTTGCGGCATAAATTCGAGTGCTTGCCGGAGGAACTGGTGGTTGATAATGACGGCGGTGATGATAACGGCGGTGACGACGTTATTTAA 1020 0.5098 MRRPLKQPQKRITDNHDFFDDLPDDLVVFILSKLSSTASSPSEFINILSTCKRLNRLGLHRMVLSKAGPKVFVIKAKNWSEHAHRFLKHCVNAANLDACYTLGMIRFYCLKNRASGLSLMAKAAMKSHAPALYSLGVIQFNGSGGTKQDKDLRAGVALCARASLLGHIDALRELGHCLHDGYGVKKNLSEGRRLLVQANARELAFVIRSVTSASPSVPSSSLTWRAGDYSVCPLLSDYVYNVAVPEVQPVGSFMREWFESGPGRVELVNGLRLCGHIGCGRAETRAHEFRRCSVCGKVNYCSRGCQALDWKLRHKFECLPEELVVDNDGGDDNGGDDVI 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0722 339 Pfam MYND finger 279 318 IPR002893 -
Lal4g0722 339 SUPERFAMILY HIT/MYND zinc finger-like 272 319 - -
Lal4g0722 339 Gene3D - 271 319 - -
Lal4g0722 339 Gene3D Tetratricopeptide repeat domain 68 211 IPR011990 GO:0005515
Lal4g0722 339 SUPERFAMILY F-box domain 12 72 IPR036047 GO:0005515
Lal4g0722 339 SUPERFAMILY HCP-like 80 198 - -
Lal4g0722 339 ProSiteProfiles Zinc finger MYND-type profile. 276 318 IPR002893 -
Lal4g0722 339 PANTHER MYND DOMAIN-CONTAINING 5 333 IPR044508 -
Lal4g0722 339 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 5 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0722 Lal-Chr4 5957009 5964286 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0722 - - adu:107463542 480.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0847 17 6385866 6387854 Lal4g0722 4 5957009 5964286 LSH