Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0705 ATGGCTGCAACAAGTAACTTGGGGTTTCAATTTCCATGGAGTTTGAGCAAAGCAAAGAAAGAAAATGTGGTCACCACATTGGAGGTTTTGAAGCTGAGTCTTTATTCTTCATGCAACACTAACACGTTGAACAATAAAAGAAGATTTTCACTGGTGACTAAAAATTCTCATAGTGGTTCTCAGAAAGTGGACACAGTTAATGGAACAAAGGTGAATGAAATGCATGCAATAGAGGCTCCTCTCTCAGGTGCAGGTGATGCAGCTTTTGTTACCAGTTTGCGTGGAAGGTTTGTGGAGGGTAGGTTTGTGTATAGACAGATTTTTGCTATAAGGTCTTATGAAATTGGACCAGATAAAACTGCAACCATGGAAACAATCATGAATTTTCTTCAGGCAAGCTTCATAATTTTTCTGCATTTACATTTTTTTGAAACTGCTCTAAATCATGTTACCAGCTCTGGGATAGGAGGAGAAGGTTTTGGAGCTACTCGTGAGATGAGCCTTCGTAAACTCATTTGGGTTGTTACTCGCATTCAAGTTCAAGTGCAAAGATATAGTAAATGGGGAGATGAAATTGAAATTGATACATGGGTTGATGCAGCTGGAAAGAATGGAATGCGAAGAGATTGGATAATCAGGGATCACTATACCAAAGAGATTATAACAAGAGCAACAAGCACATGGGTGATCATGAATAGAGAAACAAGAAGACTAAGCAAGATACCTGGTGAAGTTAAACAAGAGCTTGTTCCTTTCTACCTTAATAGGATTGCTGTTGCAAGTGAAGAAAAAGATTGTGAAAAGCTGGACAAGCTCGCTGATGATGAAACTGTTGAGAGAATCCGTTCCGGATTAGCACCAAGGTGGAACGACATGGATGCTAATCAGCATGTGAACAATGTGAAATACATTGGATGGATTTTAGAGACAATTCCAATAGAAGTGTTAGAAGATTTTAATATGACAAGCATGACGTTGGAATTTCGACGTGAATGTAGACAATCAAATTTGTTGGAATCCATAACTATTCCAACAACAAGGTTGATTGGAGAGTCCAATAATTCTATTAACAGAAAGCCTCACCTTCAATACACTCACATGCTTCGTCTTCAACATGATAGATCAGACGTAGTACGAGCCAGAACTGAATGGCATTTTAAGCAAAACCAACAGTGA 1176 0.3869 MAATSNLGFQFPWSLSKAKKENVVTTLEVLKLSLYSSCNTNTLNNKRRFSLVTKNSHSGSQKVDTVNGTKVNEMHAIEAPLSGAGDAAFVTSLRGRFVEGRFVYRQIFAIRSYEIGPDKTATMETIMNFLQASFIIFLHLHFFETALNHVTSSGIGGEGFGATREMSLRKLIWVVTRIQVQVQRYSKWGDEIEIDTWVDAAGKNGMRRDWIIRDHYTKEIITRATSTWVIMNRETRRLSKIPGEVKQELVPFYLNRIAVASEEKDCEKLDKLADDETVERIRSGLAPRWNDMDANQHVNNVKYIGWILETIPIEVLEDFNMTSMTLEFRRECRQSNLLESITIPTTRLIGESNNSINRKPHLQYTHMLRLQHDRSDVVRARTEWHFKQNQQ 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0705 391 CDD 4HBT 140 232 - -
Lal4g0705 391 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 284 384 IPR029069 -
Lal4g0705 391 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 28 390 - -
Lal4g0705 391 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 28 390 IPR045023 GO:0006633|GO:0016297
Lal4g0705 391 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 102 258 IPR029069 -
Lal4g0705 391 Pfam Acyl-ACP thioesterase 103 385 IPR002864 GO:0006633|GO:0016790
Lal4g0705 391 Gene3D Hotdog Thioesterase 95 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0705 Lal-Chr4 5716012 5718908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0705 95 387 Acyl Lipid Metabolism Gene Families AT1G08510 52.560 5.75e-103 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0705 K10781 - gmx:100814191 558.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0705 4 5716012 5718908 Lal4g0705 4 5716012 5718908 ECH
Lal17g0837 17 6268478 6271125 Lal4g0705 4 5716012 5718908 LSH