Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0682 ATGGAGCATAACGGCGATGATAACGCCGTCAATGGAACCAGCAACAACGATAGGGAAGAACAAGAAGAGGCATTGGTAGCATTAATCGAACACCGTACCCGCGAAGTTAAAAACTTCCGTCAACGTCTCGTTTATTATCAATCTCAGCTTGCGGAGGCCGAGAAAAGGTTGCAAGATTCCGAATCCAAATTGGCTCGCCTCCGAAGTCAAACAAATGCGGCATCATCTAGGAGTCGTTTAGAGGATGGAACTAAAACTGTGAAGACAGAGCGTAGATCAACCAGTCCCATGGATAGAAATGAAGGTTCTTCAAAACATCAGCATCAATCTAAACCAGAACTTCGTATTCCTGACGTGCCTCCGAAAATTTCAAAGCCTTCACCATGGGCGAAGTCTTCTGCAAAACCATCAGCAAGTTCTGGTGCTGAAACATCTATCGTAAAATCTGACAGCAACTCTCAGAGACCTTCTTCTCAGCAACAAAGCATCGAAAACAAAGACAAAGGGACAAAACGAAAATTTGTCCAGAAAGAACACAAGGAATTGATTCCTTTATTACGTCAGAGTTCTTCAGCACGCTTGGTGAACTGTCAAACAAGCAACCACATCTCAAGTCAACACAAGAGGAAATTGCGGAGTCTTGCTTTGTGTCCTGTGAATGATCAGCTTTTTGTGACCAGTGCTTTAGATTCAATGGTCAACTTGTGGCAAGTTCAAGCTAAGGGATCAGGAGCCTCTCTTCTTAGTGCTACTGATTGTATGTCCCCGCAGAGGAAATGGCCAGAGGCTATAGCATGGCATCCCGAAGGAAACGGCATATTTTCAGTATATAGTGCTGATGGTGGAGACTCCCAAGTATCAGTTACAAATCTGAATAGAGGACGAGGGGGAGAACGTGTGAAGTTCTTAGAGGATAAGCCACATGTTAAGGGTCTTATCAATGGCATTGATTTTATGCCCTGGGAAGATACATGTTTTGTAACTGGGGGAAGTGACCATGCTGTTATACTTTGGAGTGAACAGGACGGTGATAATAAATGGAAGTCAAAACCATTGCACAGGAATCTTCATTCTTCTGCTGTTATGGGAGTTGCTGGTATGCAGCAGAAGCAGATTGTATTGTCTGCTGGTGCAGACAAGAGAATTTTTGGGTTTGATGTTCGTGTAGGAAGGGCAGATTTCAAGCATCAGATAGATAGTAAATGCATGAGTGTCCTGCCCAATCCTCGTGACTTCAATCTATTTATGGTTCAAACAGGGACTCATGAGAAGCAGCTTCGGTTATTCGATATTCGGCTGCGGCAAACCGAACTTCATGTTTTTGGGTGGAAACAAGAAAGCAGTGACTCTCAATCAGCTCTGATAAATCAAGCTTGGTCTCCTGATGGACTTTATATAACATCTGGTTCAGCTGATCCTGTGATTCACATCTTTGATATCAGATATAATGCTCATAGGCCTTCTCAATCTATAAGAGCTCATCAAAAACGTGTCTTCAAAGCCGTGTGGCTTGAATCTGTTCCTCTTCTCATTTCCATATCCTCTGATCTCAACATTGGACTACACAAAGTTTACTAG 1578 0.4316 MEHNGDDNAVNGTSNNDREEQEEALVALIEHRTREVKNFRQRLVYYQSQLAEAEKRLQDSESKLARLRSQTNAASSRSRLEDGTKTVKTERRSTSPMDRNEGSSKHQHQSKPELRIPDVPPKISKPSPWAKSSAKPSASSGAETSIVKSDSNSQRPSSQQQSIENKDKGTKRKFVQKEHKELIPLLRQSSSARLVNCQTSNHISSQHKRKLRSLALCPVNDQLFVTSALDSMVNLWQVQAKGSGASLLSATDCMSPQRKWPEAIAWHPEGNGIFSVYSADGGDSQVSVTNLNRGRGGERVKFLEDKPHVKGLINGIDFMPWEDTCFVTGGSDHAVILWSEQDGDNKWKSKPLHRNLHSSAVMGVAGMQQKQIVLSAGADKRIFGFDVRVGRADFKHQIDSKCMSVLPNPRDFNLFMVQTGTHEKQLRLFDIRLRQTELHVFGWKQESSDSQSALINQAWSPDGLYITSGSADPVIHIFDIRYNAHRPSQSIRAHQKRVFKAVWLESVPLLISISSDLNIGLHKVY 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0682 525 MobiDBLite consensus disorder prediction 64 80 - -
Lal4g0682 525 SUPERFAMILY WD40 repeat-like 209 521 IPR036322 GO:0005515
Lal4g0682 525 MobiDBLite consensus disorder prediction 81 115 - -
Lal4g0682 525 Pfam WD domain, G-beta repeat 456 479 IPR001680 GO:0005515
Lal4g0682 525 Gene3D - 407 525 IPR015943 GO:0005515
Lal4g0682 525 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 7 524 - -
Lal4g0682 525 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 7 524 - -
Lal4g0682 525 MobiDBLite consensus disorder prediction 1 23 - -
Lal4g0682 525 SMART WD40_4 348 386 IPR001680 GO:0005515
Lal4g0682 525 SMART WD40_4 484 523 IPR001680 GO:0005515
Lal4g0682 525 SMART WD40_4 198 237 IPR001680 GO:0005515
Lal4g0682 525 SMART WD40_4 434 479 IPR001680 GO:0005515
Lal4g0682 525 SMART WD40_4 296 339 IPR001680 GO:0005515
Lal4g0682 525 MobiDBLite consensus disorder prediction 56 174 - -
Lal4g0682 525 Coils Coil 36 77 - -
Lal4g0682 525 Gene3D - 30 406 IPR015943 GO:0005515
Lal4g0682 525 MobiDBLite consensus disorder prediction 130 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0682 Lal-Chr4 5333883 5339555 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0682 - - gmx:100799587 790.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0682 4 5333883 5339555 Lal4g0682 4 5333883 5339555 ECH
Lal19g0999 19 13869381 13871262 Lal4g0682 4 5333883 5339555 PCT
Lal4g0682 4 5333883 5339555 Lal19g0999 19 13869381 13871262 PCT