Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0999 ATGGACCAACATGAGAAAGCTTTGTTGCATTCAATAGAAAATGCTACTGCTGAAGTCAATACCCTTCGTTCTCAGCTTCTGAGAGCAGAAAAAAGGTTGGAATACGCTCAATCTGAATTGGCTTTAATTCGAGCTATAAAAACAACCAATGTTCAAACTATGGACAAAGGGACTAAAAGAAAATTTGATGAGAAACAACACAAGGATTTGATTTCTTTAATGTGCAAGAATATTTATCCATACCCAGTAAACTTTCAAAAAAGCTACTATATCTCAAGTAAACATGATAAGAAATTGCGAAGTCTTGCTTTGTGTCCTGTGAATGATAAGATTTTTGCAACAAGTGCTATGGATGGAATTGTCAACTTGTGGGAAGTTATTTCTTCCGGAGAAGAAGTCAACTTGAATAGCAGTAATAATTGTTTAACCCCAGACCAATGTAGATGGCCAGAAGATATAGCTTGGCACCCAGAAGGGGATAGAATCTTTTCTGTATATAATGCTAATAGTCTTGATTCTCAAATATCCATTATGTATTTGAGTAGAGTAGGAGAACATCCTGAAGAGAGTAAATGA 576 0.3542 MDQHEKALLHSIENATAEVNTLRSQLLRAEKRLEYAQSELALIRAIKTTNVQTMDKGTKRKFDEKQHKDLISLMCKNIYPYPVNFQKSYYISSKHDKKLRSLALCPVNDKIFATSAMDGIVNLWEVISSGEEVNLNSSNNCLTPDQCRWPEDIAWHPEGDRIFSVYNANSLDSQISIMYLSRVGEHPEESK 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0999 191 Gene3D - 6 181 IPR015943 GO:0005515
Lal19g0999 191 SUPERFAMILY WD40 repeat-like 84 178 IPR036322 GO:0005515
Lal19g0999 191 ProSiteProfiles Trp-Asp (WD) repeats profile. 92 126 IPR001680 GO:0005515
Lal19g0999 191 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 49 182 - -
Lal19g0999 191 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 49 182 - -
Lal19g0999 191 Coils Coil 12 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0999 Lal-Chr19 13869381 13871262 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0999 - - lang:109326912 362.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g0999 19 13869381 13871262 Lal19g0999 19 13869381 13871262 ECH
Lal19g0999 19 13869381 13871262 Lal4g0682 4 5333883 5339555 PCT
Lal4g0682 4 5333883 5339555 Lal19g0999 19 13869381 13871262 PCT