Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0655 ATGAAGGAGACGCTGTTTACTATTCTCTCCAATCACACTAACCAAAACGACACCGTATCAACAAATAACAAATCCGAAGAAGAAGAAGAGAATGAAGACATTGAGCTAATAATGGTTCCATCTCACTCCTGGAAACCGAACCCGGTTCGAACCCAACCCGGTTCACAGCGCGTGTCATCCACACTCGAGAAATCGCTAGCAAACGGCGACATATACGCCGGAACTCTCTCCGGAAACGTACCTGACGGCGCCGGAAAATACCTCTGGTCCGACGGTTGCATTTACGAAGGAGAATGGAAGAACGGAAAAGCGTGCGGCAAAGGAATATTCTCATGGCCTTCAGGTGCAACTTACGAAGGAGAGTTTCTCTGCGGTAGGATGCACGGTACCGGAACCTTCACCGGCGTAGACGGCGACAGTTATAGAGGATCCTGGGTGGCGGACCGGAAGCACGGTTTCGGAGAAAAGCGTTACGCTAACGGCGACGTGTATAACGGTTGGTGGAGGTTCAATTTGCAAAACGGTGAGGGTAGATATGTGTGGTGTAACGGGAACGAGTACTTTGGTGAGTGGAAGAACGGAACGATTTCGGGGAACGGGGTTTTGGTGTGGAAGAATGGGAATAGGTATGAAGGGTGGTGGGAGAATGGGGTTCCAAAAGGGGAAGGAGTGTTTATGTGGCGCGACCGGAGTAGCTCGAAGGGGAATTGGGGTAAAGAATTTGTGAATGAAGAGAGGGTTGTGAAGAAAAGGATGAGTTTTGATAATAATAATAGTAAGAGTGTGGGGTTTCCTAGGATTTGTATTTGGGAACTTGATGGTGAAGCTGGAGATATTACTTGTGATATTGTTGATAATGTTGAAGCTTCTATGTTTTATAAGAATGGGAGTGAGTTTGAAAATGGTGATGGTGTTGGTTTTGGGAAGTTGCAGAAGAGTCATTGTAGTTCTGTTGAAGGGGATGTTAAGAAACCTGGGTATATTGTGTCAAAGGGGCATAAGAATTATGATTTGATGCTTAGTCTTCAAATGGGTATTAGAATGTTGCTAGGATTTGTTATTGCTGGGTTAGAAGGGTTTATTGAGTTTGAGGTCTCCCATGAACCTAGGATTAGATACTCCGTTGGGAAACTTGCTTCGGTAGTGCGAGATCTTAGGCCAGGAGATTTTGATCCGAAGGAGAAGTTCTGGACGAGATTCCCACCGGAAGGGTCCAAGTTTACGCTGCCGCATCAGTCAGTGGACTTCAGGTGGAAAGACTACTGTCCTGTGGTGTTCAGGCATCTAAGGAAATTATTTGACATAGATCCTGCTGATTACATGCTTGCTATTTGCGGCAATGACACACTTAGGGAGATGTCTTCTCCTGGCAAAAGTGGAAGCTTCTTTTACCTCACTCAAGACGACCGGTTCATTATCAAGACCCTGAAGAAGTCTGAAGTCAAGTTGGCGGTCATGACAGTTGCTTATCAGGATGCTTTCAAGTTACTATCAACATGTTTCTCAGTACAAGAACTCCCTGGTAACAAAATTCCTGGGTGTTCATTGTGTCAAACCAGTTGGAAGTCCGAAGAGTATCGGATCCATAAGCGATTTGATCTCAAAGGTTCTTCTCATGGTCGTATAACGGATAAATCCCAGGAAGAGATTGACGAGACTACCACTCTCAAAGACCTTGACCTTAATTATGTCTTTCGCCTTGAACAATCTTGGTTTCAAGAGCTTATGTGGCAACTTGATAGAGACTGTGAATTCCTTGAAGCAGAAGGAATAATGGATTATAGTCTTTTGGTTGGCCTTCATTTTTGTGATGACTACTCAACTGATGAAATTAAAAGTTCACCACATAATTTATATTCAGGAAACATGGGAAAGGATGTGAAACAGGATTTTAGGTGGATGCCAATAGGCCGATGGACCGATTATGACTTCAGCTGTCATGGCAAATCTAGATGCGGGTTTGTTGATCACAAGTGCTGGGGACCTCTAATCCGGCTGGGAATTGATATGCTTGCCAGAGCCGAGCGAGTATGCAAAGCTGGATTTGATCAGCACACTGGTAGTGGAAGTAGCCATTCTACCCCTTCAGACATTAGTGGTGGTGAGATCTCTAATGTAATCCTCTACTTTGGTATCATTGACATTCTCCAAGACTATGATATTAGCAAAAGGCTTGAGCATGCATACAAGTCACTACAAGCGGACCCCACCTCCATCTCAGCCGTTGATCCCAAGCTATACTCTAAAAGGTTTCGGGATTTCATACACAGAATATTCATAGAGGACAAGTGA 2292 0.4463 MKETLFTILSNHTNQNDTVSTNNKSEEEEENEDIELIMVPSHSWKPNPVRTQPGSQRVSSTLEKSLANGDIYAGTLSGNVPDGAGKYLWSDGCIYEGEWKNGKACGKGIFSWPSGATYEGEFLCGRMHGTGTFTGVDGDSYRGSWVADRKHGFGEKRYANGDVYNGWWRFNLQNGEGRYVWCNGNEYFGEWKNGTISGNGVLVWKNGNRYEGWWENGVPKGEGVFMWRDRSSSKGNWGKEFVNEERVVKKRMSFDNNNSKSVGFPRICIWELDGEAGDITCDIVDNVEASMFYKNGSEFENGDGVGFGKLQKSHCSSVEGDVKKPGYIVSKGHKNYDLMLSLQMGIRMLLGFVIAGLEGFIEFEVSHEPRIRYSVGKLASVVRDLRPGDFDPKEKFWTRFPPEGSKFTLPHQSVDFRWKDYCPVVFRHLRKLFDIDPADYMLAICGNDTLREMSSPGKSGSFFYLTQDDRFIIKTLKKSEVKLAVMTVAYQDAFKLLSTCFSVQELPGNKIPGCSLCQTSWKSEEYRIHKRFDLKGSSHGRITDKSQEEIDETTTLKDLDLNYVFRLEQSWFQELMWQLDRDCEFLEAEGIMDYSLLVGLHFCDDYSTDEIKSSPHNLYSGNMGKDVKQDFRWMPIGRWTDYDFSCHGKSRCGFVDHKCWGPLIRLGIDMLARAERVCKAGFDQHTGSGSSHSTPSDISGGEISNVILYFGIIDILQDYDISKRLEHAYKSLQADPTSISAVDPKLYSKRFRDFIHRIFIEDK 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0655 763 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 353 759 IPR002498 GO:0016307|GO:0046488
Lal4g0655 763 Coils Coil 9 29 - -
Lal4g0655 763 Pfam MORN repeat 118 139 IPR003409 -
Lal4g0655 763 Pfam MORN repeat 210 230 IPR003409 -
Lal4g0655 763 Pfam MORN repeat 187 209 IPR003409 -
Lal4g0655 763 Pfam MORN repeat 72 93 IPR003409 -
Lal4g0655 763 Pfam MORN repeat 166 185 IPR003409 -
Lal4g0655 763 Pfam MORN repeat 95 116 IPR003409 -
Lal4g0655 763 Pfam MORN repeat 141 163 IPR003409 -
Lal4g0655 763 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 370 763 IPR023610 -
Lal4g0655 763 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 41 351 IPR023610 -
Lal4g0655 763 SUPERFAMILY SAICAR synthase-like 370 759 - -
Lal4g0655 763 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 321 491 IPR027484 -
Lal4g0655 763 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 445 758 IPR002498 GO:0016307|GO:0046488
Lal4g0655 763 Gene3D - 102 149 - -
Lal4g0655 763 Gene3D - 61 101 - -
Lal4g0655 763 Gene3D - 189 262 - -
Lal4g0655 763 CDD PIPKc_AtPIP5K_like 335 758 - -
Lal4g0655 763 Gene3D - 523 759 - -
Lal4g0655 763 MobiDBLite consensus disorder prediction 9 32 - -
Lal4g0655 763 SMART PIPK_2 386 760 IPR002498 GO:0016307|GO:0046488
Lal4g0655 763 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 41 351 - -
Lal4g0655 763 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 370 763 - -
Lal4g0655 763 PIRSF PIP5K_plant 362 763 IPR017163 GO:0005524|GO:0016308
Lal4g0655 763 PIRSF PIP5K_plant 7 250 IPR017163 GO:0005524|GO:0016308
Lal4g0655 763 PIRSF PIP5K_plant 242 356 IPR017163 GO:0005524|GO:0016308
Lal4g0655 763 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 67 194 - -
Lal4g0655 763 SMART morn 116 137 IPR003409 -
Lal4g0655 763 SMART morn 208 229 IPR003409 -
Lal4g0655 763 SMART morn 70 91 IPR003409 -
Lal4g0655 763 SMART morn 185 206 IPR003409 -
Lal4g0655 763 SMART morn 93 114 IPR003409 -
Lal4g0655 763 SMART morn 139 160 IPR003409 -
Lal4g0655 763 SMART morn 162 183 IPR003409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0655 Lal-Chr4 4960809 4965880 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0655 50 762 Acyl Lipid Metabolism Gene Families AT1G77740 57.965 0.0 804
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0655 K00889 - gmx:100780680 993.416
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0786 17 5740739 5745504 Lal4g0655 4 4960809 4965880 LSH
Lal14g1404 14 15336414 15341013 Lal4g0655 4 4960809 4965880 PCT
Lal7g0841 7 15021996 15027151 Lal4g0655 4 4960809 4965880 PCT
Lal4g0655 4 4960809 4965880 Lal14g1404 14 15336414 15341013 PCT
Lal4g0655 4 4960809 4965880 Lal7g0841 7 15021996 15027151 PCT