Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0786 ATGCAGGAGACGGTGGTAACTACTGATTCTAACTACACTAACGCAAACGACACCGTATCAAGAAACAATAACTCCGAAGAAGAGAAAGAAAATGAAGAGAGTAAAGATATCGAGTTAATAGTGGTACCAGCTTTTTCTCGTAGACCGAACCCGGTTCGAGTTCAACCCGGTCCACGGCGCGTGTCACCCACGATAGAGAAATCCCTACCAAACGGTGACGTTTACGCTGGAACACTTACCGGAAATATACCGGACGGTACCGGAAAATATATCTGGTCAGACGGGTGCATGTACGAAGGAGAATGGAAGAACGGAAAAGCGTGCGGCAAAGGAATATTCTCATGGCCGTCAGGCGCCACCTACGACGGCGAGTTTCACTGCGGTAGGATGCATGGTACCGGAACCTTCGTCGGCGTCGACGGCGACAGTTACAGAGGATCCTGGCTCGCTGATCGGAAGCATGGATTCGGCGAGAAGCGTTACGGTAACGGTGATGTGTACGAGGGTTCGTGGAGGTTCAATTTGCAAGACGGTGAGGGTAGGTATGCGTGGTGTAACGGGAACGAGTACGTTGGGGAGTGGAGGAACGGAACGATATCGGGGAACGGGGTTTTGGTTTGGAGGAACGGGAATAGGTATAGAGGGTGGTGGGAGAACGGTGTTCCGAAAGGCGAAGGCGTGTTTACGTGGCGCGATGGGAGTAGTTCAAAGGGGAATTGGGGAAAGGAATTTGTGAATGAAGAGAGAGTTGTGAAGAAGAGGGTGAGTTTTGATGGTAATTGTAATAAGAGTGTAGGGTTTCCTAGGATTTGTATTTGGGAACATGATGGTGAAGCTGGTGATATTACTTGTGATATTGTTGATAATGTTGAAGCTTCTATGTTTTATAAGGATGGAAGTCAGTTTCAAAATGGTGGAGGTGGTGGTGGTGGTGATTGTGATCGTGATGGTTTCGGGCTGTTGCCGAAGAGTCCTTGTTCTTCGATTGAAGGGGATGTTAAGAAACCTGGGCATACTGTGTCGAAAGGGCATAAGAATTATGATTTGATGCTTAATCTTCAACTTGGTATCAGGTACACTGTTGAGAAGCATGCTTCGGTGCTGCGAGAGCTTAGGCCGGGAGATTTTGATCCGAGAGAGAAGTTCTGGACGCGATTTCCACCAGAAGGGTCTAAGTTTACGCCTCCTCATCAGTCAATGGACTTCAGGTGGAAAGACTACTGCCCTGTGGTCTTCAGATATCTAAGGGAACTATTTGCCATAGATCCTGCCCATTACATGCTTGCTATTTGTGGCAATGACGCACTTAGGGAGATGTCTTCTCCAGGCAAAAGTGGAAGTTTCTTTTACCTCACTCAAGACGACCGGTTCATTATCAAAACCTTGAAGAAGTCCGAAGTCAAGGTGCTAATCCGGATGCTTCCAAGTTACTATCAACATGTTTGTCAGTACAAGAACTCCCTGGTAACAAAATTCCTTGGTGTTCACTGTGTCAAACCAGTTGGAGGTCAGAAGACTCGGTTTATTGTGATGGGCAATGTGTTTTGTTCGGATTATCGGATCCATAAGCGGTTTGATCTGAAAGGTTCTTCTCATGGTCGTATAACGGATAAACCCCAGGAGGAGATTGATGAGACTACCACTCTCAAAGACCTTGATCTTAAGTTTGTCTTTCATCTTGAACAATCTTGGTTTCAAGAGCTTAAGTGGCAACTTGATAGAGACTGTGAATTCCTGGAAGCAGAGGGAATAATGGATTATAGTCTTTTGATTGGCCTTCATTTTCGTCATGATTACTTAATTGATGAAATTAAAAGCTCACCAGATAAGTTGGTTCCAGGAAAGAGGGACATGCAAAGGGATGAGATACATGATTTTAGGTGGATACCCATTGGCCGGGGACCTCTAATCCGGTTGGGAACCGATATGCCTGCCAAAGCCGAGAGGGTGAGTAAAGCCGGATTTGATCTGCACACTGGTAAAGGAAGTAGCAATTCTACACCTTTAGACAGTAGTGGTGAGATCTCTGATGTAATCCTCTACTTTGGAATCATTGACATTCTACAAGACTATGATATTAGCAAAAAGCTAGAGCATGCATACAAGTCACTACAAGCCGATCCCACCTCCATCTCAGCCGTTGATCCCAAGCTATACTCCAAAAGGTTTCGGAACTTCATACACCGAATCTTTGTAGAGGACAAATGA 2208 0.4579 MQETVVTTDSNYTNANDTVSRNNNSEEEKENEESKDIELIVVPAFSRRPNPVRVQPGPRRVSPTIEKSLPNGDVYAGTLTGNIPDGTGKYIWSDGCMYEGEWKNGKACGKGIFSWPSGATYDGEFHCGRMHGTGTFVGVDGDSYRGSWLADRKHGFGEKRYGNGDVYEGSWRFNLQDGEGRYAWCNGNEYVGEWRNGTISGNGVLVWRNGNRYRGWWENGVPKGEGVFTWRDGSSSKGNWGKEFVNEERVVKKRVSFDGNCNKSVGFPRICIWEHDGEAGDITCDIVDNVEASMFYKDGSQFQNGGGGGGGDCDRDGFGLLPKSPCSSIEGDVKKPGHTVSKGHKNYDLMLNLQLGIRYTVEKHASVLRELRPGDFDPREKFWTRFPPEGSKFTPPHQSMDFRWKDYCPVVFRYLRELFAIDPAHYMLAICGNDALREMSSPGKSGSFFYLTQDDRFIIKTLKKSEVKVLIRMLPSYYQHVCQYKNSLVTKFLGVHCVKPVGGQKTRFIVMGNVFCSDYRIHKRFDLKGSSHGRITDKPQEEIDETTTLKDLDLKFVFHLEQSWFQELKWQLDRDCEFLEAEGIMDYSLLIGLHFRHDYLIDEIKSSPDKLVPGKRDMQRDEIHDFRWIPIGRGPLIRLGTDMPAKAERVSKAGFDLHTGKGSSNSTPLDSSGEISDVILYFGIIDILQDYDISKKLEHAYKSLQADPTSISAVDPKLYSKRFRNFIHRIFVEDK 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0786 735 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 44 735 - -
Lal17g0786 735 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 332 513 IPR027484 -
Lal17g0786 735 Gene3D - 192 265 - -
Lal17g0786 735 Gene3D - 64 104 - -
Lal17g0786 735 Gene3D - 105 153 - -
Lal17g0786 735 PIRSF PIP5K_plant 9 253 IPR017163 GO:0005524|GO:0016308
Lal17g0786 735 PIRSF PIP5K_plant 244 735 IPR017163 GO:0005524|GO:0016308
Lal17g0786 735 CDD PIPKc_AtPIP5K_like 346 730 - -
Lal17g0786 735 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 339 731 IPR002498 GO:0016307|GO:0046488
Lal17g0786 735 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 70 157 - -
Lal17g0786 735 Coils Coil 15 35 - -
Lal17g0786 735 MobiDBLite consensus disorder prediction 1 36 - -
Lal17g0786 735 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 44 735 IPR023610 -
Lal17g0786 735 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 140 243 - -
Lal17g0786 735 SMART morn 142 163 IPR003409 -
Lal17g0786 735 SMART morn 188 209 IPR003409 -
Lal17g0786 735 SMART morn 73 94 IPR003409 -
Lal17g0786 735 SMART morn 211 232 IPR003409 -
Lal17g0786 735 SMART morn 119 140 IPR003409 -
Lal17g0786 735 SMART morn 96 117 IPR003409 -
Lal17g0786 735 SMART morn 165 186 IPR003409 -
Lal17g0786 735 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 431 730 IPR002498 GO:0016307|GO:0046488
Lal17g0786 735 Pfam MORN repeat 167 188 IPR003409 -
Lal17g0786 735 Pfam MORN repeat 144 166 IPR003409 -
Lal17g0786 735 Pfam MORN repeat 75 97 IPR003409 -
Lal17g0786 735 Pfam MORN repeat 98 119 IPR003409 -
Lal17g0786 735 Pfam MORN repeat 121 142 IPR003409 -
Lal17g0786 735 Pfam MORN repeat 213 234 IPR003409 -
Lal17g0786 735 Pfam MORN repeat 190 212 IPR003409 -
Lal17g0786 735 MobiDBLite consensus disorder prediction 1 21 - -
Lal17g0786 735 Gene3D - 514 731 - -
Lal17g0786 735 SUPERFAMILY SAICAR synthase-like 342 731 - -
Lal17g0786 735 SMART PIPK_2 372 732 IPR002498 GO:0016307|GO:0046488
Lal17g0786 735 MobiDBLite consensus disorder prediction 22 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0786 Lal-Chr17 5740739 5745504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0786 26 734 Acyl Lipid Metabolism Gene Families AT1G77740 64.420 0.0 944
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0786 K00889 - gmx:100808235 1170.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0786 17 5740739 5745504 Lal4g0655 4 4960809 4965880 LSH
Lal14g1404 14 15336414 15341013 Lal17g0786 17 5740739 5745504 PCT
Lal7g0841 7 15021996 15027151 Lal17g0786 17 5740739 5745504 PCT
Lal17g0786 17 5740739 5745504 Lal14g1404 14 15336414 15341013 PCT
Lal17g0786 17 5740739 5745504 Lal7g0841 7 15021996 15027151 PCT