Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0489 ATGACACGAGATAATCTTTACTGGCTGAGTCACGACCAGGTCGCTCTCTTTAAGACGTTTCGTGGTACTGCCTCAAGGTGCAAGCAGACTATCAACCACGCCGTCCCCAGGATAAAACAGCCCAGCTCTCTGTTATACGATATCTTACTGCACTGTAAGAATCGCTCTGGAATACACCCAAAATATGGCTACCAGTGCCAATTCAGAAATACCCACAATATTGGAATATCTTATTCCAACTCTAGTGCCACGGAAAGAAAGGGAGAGAAAGAGGCCGGAAATGCGTCGGCAGAAAATATTGAGGGAGAAAGAAAAGAGCAAGTCGCTCTCTTTAAGACGTTTCGTGGTACTGCCTCAAGGTGCAAGCAGACTATCAACCACGCCGTCCCCAGGATAAAACAGCCCAGCTCTCTGTTATACGATATCTTACTGCACTGTAAGAATCGCTCTGGAATACACCCAAAATATGGCTACCAGTGCCAATTCAGAAATACCCACAATATTGGAATATCTTATTCCAACTCTAGTGCCACGGAAAGAAAGGGAGAGAAAGAGGCCGGAAATGCGTCGGCAGAAAATATTGAGGGAGAAAGAAAAGAGCAAACTCTACCAGAGCTTACTGTGACTGTTCCAGTGCCAGAGGGAACCAAATCAAGGTTTGTCACTGTTGAGATAAAGAAGAACCATTTAAAAGTTGGACTCAAAGGCCAGCCTCCAATTATTGAGGGGGACTTGTTTAAGTCTGTCAAGCCTGATGACAGCTATTGGAGCATAGAGGATCAGAAGGTAATTTCTATTCTCTTGACCAAACAAAATCAAATGGATTGGTGGAAATATCTGGTAAAAGGTGAACCTGAAATTGATACACAAAAAGCTGAACCCGAGAACAGCAGACTTTCTGACCTGGATCCAGAGACTCGGTCCACTGTTGAAAAAATGATGTTTGATCAGAGGCAGAAAACTATGGGCCTCCCTACCAGTGATGAGCTCCAGAAGCAGGAAATCATGAAGAAATTTATGGCTGAGCATCCTGAGATGGACTTCTCCAGGGCAAAAATGGCATAA 1065 0.4432 MTRDNLYWLSHDQVALFKTFRGTASRCKQTINHAVPRIKQPSSLLYDILLHCKNRSGIHPKYGYQCQFRNTHNIGISYSNSSATERKGEKEAGNASAENIEGERKEQVALFKTFRGTASRCKQTINHAVPRIKQPSSLLYDILLHCKNRSGIHPKYGYQCQFRNTHNIGISYSNSSATERKGEKEAGNASAENIEGERKEQTLPELTVTVPVPEGTKSRFVTVEIKKNHLKVGLKGQPPIIEGDLFKSVKPDDSYWSIEDQKVISILLTKQNQMDWWKYLVKGEPEIDTQKAEPENSRLSDLDPETRSTVEKMMFDQRQKTMGLPTSDELQKQEIMKKFMAEHPEMDFSRAKMA 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0489 354 MobiDBLite consensus disorder prediction 176 198 - -
Lal4g0489 354 Pfam CS domain 201 270 IPR007052 -
Lal4g0489 354 ProSiteProfiles CS domain profile. 192 281 IPR007052 -
Lal4g0489 354 PANTHER NUCLEAR MIGRATION PROTEIN NUDC 86 353 - -
Lal4g0489 354 MobiDBLite consensus disorder prediction 84 101 - -
Lal4g0489 354 MobiDBLite consensus disorder prediction 178 198 - -
Lal4g0489 354 CDD p23_NUDC_like 201 281 - -
Lal4g0489 354 PANTHER NUCLEAR MOVEMENT PROTEIN NUDC 86 353 IPR037898 -
Lal4g0489 354 SUPERFAMILY HSP20-like chaperones 201 315 IPR008978 -
Lal4g0489 354 Gene3D - 200 315 IPR008978 -
Lal4g0489 354 MobiDBLite consensus disorder prediction 82 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0489 Lal-Chr4 3495499 3504051 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0489 K25866 - sind:105160361 273.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0489 4 3495499 3504051 Lal4g0489 4 3495499 3504051 ECH
Lal17g0562 17 4007629 4010317 Lal4g0489 4 3495499 3504051 LSH