Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0562 ATGGCGATAATCTCCGATTTAGAAGAACCCGAGCAGAACAACCAGACACAGTCCTCGTCATCAAAGCCCCAAACAGTTCCATCTAACTTCAGCTCGAGTTTCGATCCATCGAAACCCCTCTCTTTCGTGGAGAGGGTTTTCGAATTCATCTCACGAGAGAGCGATTATTTGACGAGCGAGAACGCGGAGAAGGAGATAACATCGTTGGTGCGCGCTGTGAAGGAGAAGACGAAGAAGAAGAAGAGAGAGGAGGAGGAGGCGAAGGCTGCGGAGGAGAGAGAGAAAGCTGATAAAAGGTTGAAAGAAGAGAAGAAGAAGAATCAGATAGTAGTGGAGGAAAAGAACAAGAAGGAAGAAGAAAGAAGTGCCAGAGTTCCAAATAAAGGTAATGGATTGGATTTGGAGAAATATTCTTGGACTCAGAGTCTACAGGAGGTAAATGTGAGTATTCCAGTACCAGAGGGTACCAAAGCAAGGTTTCTCACTGTCGAGATAAAGAAGAACCATCTCAAAGGGGACTTGTGTAAGTCTGTCAAGCCTGATGACTGCTATTGGAGCATAGAGGATCAGAAGGCAATCTCTATTCTCTTGACCAAACATGATCAAATGGAGTGGTGGAAATGTCTGGTGAAAGGTGACCCTGAAATTGACACTCAGAAAGTTGAACCTGAGAACAGCAAACTTTCTGACCTTGATCCAGAGACTCGTTCAACTGTTGAAAAAATGATGTTTGATCAGAGGCAGAAGTCTATGGGCCTCCCAAGTAGTGATGAGCTCCAAAAGCAGGAGGTTCTGAAGAAATTTATGTCTGAGCATCCAGAGATGGATTTTTCGAGGGCAAAAATAGCATAA 852 0.4437 MAIISDLEEPEQNNQTQSSSSKPQTVPSNFSSSFDPSKPLSFVERVFEFISRESDYLTSENAEKEITSLVRAVKEKTKKKKREEEEAKAAEEREKADKRLKEEKKKNQIVVEEKNKKEEERSARVPNKGNGLDLEKYSWTQSLQEVNVSIPVPEGTKARFLTVEIKKNHLKGDLCKSVKPDDCYWSIEDQKAISILLTKHDQMEWWKCLVKGDPEIDTQKVEPENSKLSDLDPETRSTVEKMMFDQRQKSMGLPSSDELQKQEVLKKFMSEHPEMDFSRAKIA 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0562 283 Gene3D - 128 244 IPR008978 -
Lal17g0562 283 Coils Coil 59 121 - -
Lal17g0562 283 MobiDBLite consensus disorder prediction 70 101 - -
Lal17g0562 283 ProSiteProfiles CS domain profile. 132 210 IPR007052 -
Lal17g0562 283 Pfam CS domain 136 199 IPR007052 -
Lal17g0562 283 PANTHER PROTEIN BOBBER 2 21 281 - -
Lal17g0562 283 MobiDBLite consensus disorder prediction 1 38 - -
Lal17g0562 283 CDD p23_NUDC_like 137 210 - -
Lal17g0562 283 PANTHER NUCLEAR MOVEMENT PROTEIN NUDC 21 281 IPR037898 -
Lal17g0562 283 MobiDBLite consensus disorder prediction 8 38 - -
Lal17g0562 283 SUPERFAMILY HSP20-like chaperones 120 225 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0562 Lal-Chr17 4007629 4010317 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0562 K25866 - gmx:100813799 351.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0562 17 4007629 4010317 Lal4g0489 4 3495499 3504051 LSH