Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0485 ATGTCGTTTTCTCGTTCGATTCTGACTCGTACGGCATGGCCAGGAGGGTGCACACTACCATCAACCACCGCGAACAAGAAATCGCATTCGCAGCTGAATTCGATTTCTCAGGGGACTGGTGCGAAGAGGTTTCACGGGACGCGGTTACGTTCACATAAGGCTCTTGGATCGGAGCGGCTTCATGTGTGGCAGTCGGAGGGGCCAGGTCGGTCGCCGAAGCTGAGGGTGGTGGTTCGGTCGGCAATGTCTGCGGTGCCGAAGGAGAGGCTCGGGCTTTACGATCCGGCTATGGATAAGGACTCATGCGGTGTGGGATTCGTGGCTGAACTCTCCGGCGAAAGCAACCGTAAAACGGTGACGGATGCGTTGGAGATGTTGGTGCGCATGACTCACAGAGGAGCATGTGGGTGCGAAGCCAACACTGGAGATGGAGCAGGGATTCTTGTCGCTCTGCCTCACCACTTCTACGAAGAGGTTGTGGATTTTGAGCTTCCGCCCCTAGGAAAATATGCAGTCGGCATGCTGTTCTTGCCTACATCCAACAGTCGCAGGGAAGAGAGCAAAAAAGTTGCCCAATCCCTGGGGCACTCTATTCTTGGTTGGCGTACTGTGCCCACTGACAACATGGGATTGGGAAAATCAGCTGTGCAGACTGAGCCAGTGGTCGAACAGGTGTTCCTCACACCAAGTACTAAATCAAGAGTTGATTTGGAAAGACAGATGTATATATTAAGGAAATTGTCCATGGTTGCTATTACATCTGCATTAAACCTCCACAATGATGGCATTGCAGATTTCTATATCTGTTCACTTTCATCAAGGACGGTTGTTTATAAGGGTCAGTTAACACCAGCTCAGTTGAAGGATTACTATCTTGCAGACCTTGGCAATGAAAGGTTTACGAGCTACATGGCCCTGTTCTTCCGCTTCCTTGTTTACTTTGTGAATTTGGATGCTGGATTGGATGCAATGGGTGAGTTGATACATTCGCGGTTTTCTACAAATACCTTTCCTAGCTGGGATCGTGCTCAACCTATGCGCATATTGGGCCATAATGGAGAAATCAACACGCTTCGGGGCAACGTTAACTGGATGAAGGCACGTGAAGGCCTACTGAAGTGCAAGGAGCTCGGTCTATCAGAAAATGAGTTAAAGAAGCTTTTGCCCATTGTGGATTCAAATTCATCTGATTCAGGAGCTTTTGATGGTGTCCTTGAGTTTTTGGTTCAGTCTGGAAAAAGCCTTCCTGAAGCTGTCATGATGATGATTCCTGAAGCTTGGCAAAATGACAAGAACATGGATCCTCAGCGTAAAGCATTTTATGAATACTTCTCAGCTCTCATGGAGCCATGGGATGGGCCAGCTCTTATATCATTTACTGATGGCCATTATCTTGGAGCAACATTGGATAGGAATGGACTGCGTCCAGGACGCTTTTATGTAACCCACAGTGGACGAGTTATAATGGCGAGTGAAGTTGGGGTTGTAGACATACCACCTGAAGATGTGTCAAGGAAAGGAAGACTAAATCCTGGCATGATGCTTCTGGTGGATTTTGAGAAGCATATTGTTGTAAATGATGATGCCCTGAAGGAACAGTACTCATTGGCAAGGCCTTATGGGAAGTGGCTCAAAAAGCAGAAGATTGAACTCAAGGACATAGTTGACTCTGTTCATGAATCTGAAAGAGTGCCACCAACCATAGCTGGAGTGGTTCCAGCATCTAGTGATGATGTGGATATGAAAAACATGGGGATTCATGGCTTACTGGCTCCTTTGAAAGCTTTCGGCTATACAATTGAATCGTTGGAGATGTTATTGCTTCCCATGGCCAAAGATGCTACGGAAGCCCTTGGGTCAATGGGAAATGACACTCCATTGGCTGTCATGTCTAATAGAGAAAAACTCACTTTTGAGTACTTCAAGCAAATGTTTGCCCAAGTGACAAACCCACCGATTGATCCTATCCGAGAGAAAATAGTCACTTCCATGCAATGTATAGTTGGTCCAGAAGGTGACCTGACAGAAACCACAGAGGAACAATGCCATCGCCTCTCACTAAAAGGTCCCCTTTTATCCATTGAAGAAATGGAAGCCATTAAAAAGATGAACTATAGGGGGTGGCGGACCAAAGTTATAGACATAACATACTCAAAGGACTGTGGCAAGAAAGGATTGGAGGAAGCCTTGGACAGGATATGTACAGAAGCACATGATGCAATCAATGATGGTTATACCATTATTTTGCTGTCTGACAGAGCCTTCTCAAGGAAACGTGTTGCTGTGAGCTCTCTCCTGGCTGTCGGTGCTGTTCATCAACATCTAGTTAAAACACTTGAGCGCACAAGAGTTGCCTTAATGGTTGAATCTGCAGAGCCACGTGAAGTGCATCATTTCTGCACACTTGTGGGTTTTGGTGCTGATGCTGTGTGCCCATATTTGGCTGTAGAGGCAATTTTGCGATTTCAGGTTGATGGAAAGATCCCACCAAAAGCAGGTGGCGAATTCTACTCAAAGGATGAATTGGTCAAGAAGTACTTTAAGGCAAGCAACTACGGAATGATGAAGGTGCTTGCGAAGATGGGAATATCTACTTTGGCCTCTTACAAGGGAGCTCAGATTTTTGAAGCTCTGGGTCTTTCATCAGAAGTAATTGAAAGGTGTTTTGCTGGAACCCCGAGTCGAGTTGAGGGTGCAACATTTGAGATGCTTGCTCGTGATGCTCTTCAATTGCATGAATTGGCATTTCCTTCTCGAGTTTTCTCTCCTGGAAGTGCTGAAGCTGTAGCATTGCCAAACCCTGGGGATTATCATTGGAGAAAAGGTGGTGAAGTTCACCTGAATGATCCACTTGCCATATCAAAGCTTCAAGAGGCTGCCAGAACCAATAGCGTAGATGCATATAAACAATACTCAAAGCTCATTCATGAGTTAAATAAGGCTTGCAATTTGCGGGGACTTCTGAAATTTAAAGAGGCAGCAGTGAAGATTCCCCTTGATGAAGTAGAGTCTGCTAGTGAGATAGTTAAACGGTTTTGCACTGGGGCCATGAGTTATGGGTCAATATCGCTGGAGGCACACACAACATTAGCAACTGCAATGAATAAACTTGGAGGGAAGTCCAACACAGGTGAGGGAGGTGAGCAACCATCTCGTATGGAGCCTCTTCCTGATGGTTCAATGAACCCGAAAAGGAGTGCTATCAAGCAGGTTGCTAGTGGCAGGTTTGGAGTTTCAAGTTACTATCTTACAAATGCTGATGAATTGCAAATAAAGATGGCCCAGGGAGCAAAACCTGGCGAAGGAGGTGAGCTACCTGGTCACAAGGTTATAGGAGACATTGCTATCACTAGGAATTCAACTCCCGGGGTAGGACTTATAAGTCCACCACCTCATCATGATATATATTCCATTGAAGATCTTGCCCAATTAATTCATGATCTAAAGAATGCGAACCCTGCTGCTCGAATTAGTGTGAAGTTGGTATCTGAAGCTGGAGTTGGCGTAGTTGCTAGTGGAGTTGTTAAGGGGCATGCCGACCATGTCTTGATCTCAGGCCATGATGGGGGTACAGGGGCATCCAGATGGACTGGCATAAAGAATGCTGGGCTCCCTTGGGAACTTGGCTTGGCTGAGACCCACCAGACTTTGGTTGCTAATGACCTCCGTGGTCGAACAGTTCTCCAAACTGATGGTCAACTCAAAACTGGAAGAGATGTAGCCATAGCCGCTCTTCTTGGTGCAGAAGAGTATGGTTTCAGTACAGCTCCACTAATTACTCTCGGATGTATCATGATGCGGAAGTGCCACAAGAATACCTGTCCTGTTGGCATTGCTACCCAAGATCCAGTACTTAGAGAGAAGTTTGCTGGAGAACCTGAACATGTCATTAACTTTTTTTTCATGGTGGCTGAAGAGATGCGAGAAATCATGTCCCAGCTTGGGTTTCGGACTGTTAATGAGATGGTTGGCCGTTCAGATATGCTTGAAGTTGATAGAGAAGTCATCAAGACCAATGAGAAACTGGAGAACATTGACCTCTCTCTTTTGCTTAGACCTGCAGCTGAATTGCGCCCAGAAGCTGCTCAATACTGTGTGCAAAAACAAGATCATGGTTTGGACATGGTCTTGGATAATAAGCTTATAGGCTTGTCCAATGCTGCTTTGGAAAAGGGTCTCCCGGTATACATTGAAAGTCCAATCTGTAATGTAAATCGTGCTGTGGGAACTATGCTCAGTCACGAAGTGACTAAAAAGTACCACTTGGATGGTCTTCCCACTGACACCATTCATGTCAGATTTACTGGCAGTGCAGGGCAGAGCTTTGGTGCATTCCTCTGTCCAGGCGTCACTTTGGAACTTGAAGGTGATAGCAATGACTATGTTGGTAAAGGATTGTCAGGTGGCAAGGTTGTAGTATATCCTCCAAAGCAAAGTACCTTTGACCCTAAGAATAATATTGTAATTGGTAATGTTGCACTGTATGGGGCCACATGTGGTGAGGCTTATTTCAATGGGATGGCAGCAGAAAGATTTTCTGTGCGAAACTCTGGGGCTAAGGCAGTAGTGGAAGGTGTTGGTGATCATGGATGTGAGTACATGACTGGTGGGATAGTTGTAGTGCTTGGAAGCACGGGAAGAAATTTTGCTGCAGGTATGAGTGGTGGGATTGCTTATGTTCTTGATATAGATGGGAAATTCCAATCTCGGTGCAACCATGAGCTTGTAGATCTGGACAAGGTTGAGGAGGAGGAGGATATTACTATTCTAAAAATGTTAATACAACAACATCAGCGTCACACAAATAGTGTGCTTGCCAAAGACGTGCTTGATGACTTTGACAACCTTGTTCCAAAATTTGTAAAGGTGTTCCCCAGGGAGTATAAACGTGTTTTGGCTAGTATGAAGTTAAAGGAAGCTTCTAATGATGCAGTGGAGCCTGCTGCTAAAGATGAAGAGGAGCAAGATGAGGCAGAACTGGTGGAAAAAGATGCCTTTGAAGAGCTTAAGAAACTGGCTGATTCATCTTTGAATGGGAAACCAAGTCAGTTGGCTGATGTCTTTGAATATGTGCTGGAGATTGAACAGGCTGAAACATACAAGAGGCCTAGTCAAGTCATTGACGCTGTTAAACATAGAGGCTTTGTTGCTTACGAGCGTGAAGGTGTTCAATATAGGGATCCTAACGTCCGAATGAGTGATTGGAACGAAGTGATGGAGGAGACAAAGCCTGGTCCACTTTTGAAAACCCAGTCAGCCCGTTGCATGGATTGTGGTACTCCTTTCTGTCATCAGGAAAATTCTGGATGTCCTCTTGGAAATAAAATACCAGAGTTTAACGAGTTAGTATACCAGAATAGGTGGCGTGAAGCATTAGATAGGCTTCTCGAGACAAATAACTTCCCAGAGTTTACTGGTCGGGTGTGTCCAGCACCTTGTGAAGGTTCTTGTGTCCTTGGTATTATTGAGAATCCAGTATCTATTAAAAACATTGAATGTGCTATCATAGATAAGGCTTTTGAAGAGGGTTGGATGGTGCCACGACCTCCAGCCAAGAGAACAGGGAAAAGAGTTGCCATTATTGGAAGTGGACCAGCTGGTCTGGCAGCTGCTGATCAACTAAATAAAATGGGCCATATAGTAACTGTGTATGAAAGAGCTGATAGGATTGGAGGGCTTATGATGTATGGGGTTCCCAACATGAAAGCTGACAAAGTGGATACAGTTCAACGGCGAGTCAATCTTATGGCAGAAGAGGGAGTTAATTTTGTGGTGAATGCTAATGTTGGTCATGATCCTTTATACTCTCTTGATCGGCTTCGAGAGGAAAATGATGCTATCATCTTAGCTGTAGGAGCCACTAAACCAAGGGATCTTCCAGCACCAGGGCGGGAGCTGTCAGGAATTCATTTTGCTATGGAATTCCTTCATGCAAACACTAAAAGCTTGCTTGATAGCAATCTCCAGGATGGTAACTATATTTCTGCGGAGGGCAAGAAAGTTGTGGTCATTGGAGGGGGTGACACAGGCACAGATTGCATTGGAACATCCATTCGTCATGGGTGTAGTAGCGTCATAAATCTGGAACTTCTCCCTCAGCCACCACAGACTAGGGCCCCAGGAAACCCATGGCCACAGTGGCCTCGCATATTCCGTGTAGATTATGGGCACCAAGAAGCTACAGCTAAATTTGGCAAAGATCCAAGATCTTACGAGGTATTGACTAAGCGGTTTATAGGAGATGAAAATGGAGTAGTGAAGGGGCTTGAAGTGATTCGTGTTCGCTGGGAGAAGGATGAAACTGGGAAGTTTCAGTTTAAGGAAATTGAGGGTTCTGAGGAGATTATTGAGGCTGACCTAATTTTACTGGCCATGGGATTCCTTGGCCCCGAGCCTACAATTGCAGAGAAGTTGGGTATGGAGCAAGACAATAGGTCAAACTTCAAGGCTGATTATGGACGTTTCTCCACCACTGTCAAAGGTGTGTTTGCAGCCGGTGATTGTCGCCGCGGTCAGTCCCTGGTGGTATGGGCAATTTCGGAGGGACGGCAAGCTGCTGCACAAGTTGACAGCTACCTCATAAAAGAAAACTCAGAACACAATATTTCTGGGAATCCGGACAACCTTAACAAGAGGCAGCAGGACCTCACCAAGAGGCACCAGGGCAAACACACAGTTGCAACTTAG 6687 0.4567 MSFSRSILTRTAWPGGCTLPSTTANKKSHSQLNSISQGTGAKRFHGTRLRSHKALGSERLHVWQSEGPGRSPKLRVVVRSAMSAVPKERLGLYDPAMDKDSCGVGFVAELSGESNRKTVTDALEMLVRMTHRGACGCEANTGDGAGILVALPHHFYEEVVDFELPPLGKYAVGMLFLPTSNSRREESKKVAQSLGHSILGWRTVPTDNMGLGKSAVQTEPVVEQVFLTPSTKSRVDLERQMYILRKLSMVAITSALNLHNDGIADFYICSLSSRTVVYKGQLTPAQLKDYYLADLGNERFTSYMALFFRFLVYFVNLDAGLDAMGELIHSRFSTNTFPSWDRAQPMRILGHNGEINTLRGNVNWMKAREGLLKCKELGLSENELKKLLPIVDSNSSDSGAFDGVLEFLVQSGKSLPEAVMMMIPEAWQNDKNMDPQRKAFYEYFSALMEPWDGPALISFTDGHYLGATLDRNGLRPGRFYVTHSGRVIMASEVGVVDIPPEDVSRKGRLNPGMMLLVDFEKHIVVNDDALKEQYSLARPYGKWLKKQKIELKDIVDSVHESERVPPTIAGVVPASSDDVDMKNMGIHGLLAPLKAFGYTIESLEMLLLPMAKDATEALGSMGNDTPLAVMSNREKLTFEYFKQMFAQVTNPPIDPIREKIVTSMQCIVGPEGDLTETTEEQCHRLSLKGPLLSIEEMEAIKKMNYRGWRTKVIDITYSKDCGKKGLEEALDRICTEAHDAINDGYTIILLSDRAFSRKRVAVSSLLAVGAVHQHLVKTLERTRVALMVESAEPREVHHFCTLVGFGADAVCPYLAVEAILRFQVDGKIPPKAGGEFYSKDELVKKYFKASNYGMMKVLAKMGISTLASYKGAQIFEALGLSSEVIERCFAGTPSRVEGATFEMLARDALQLHELAFPSRVFSPGSAEAVALPNPGDYHWRKGGEVHLNDPLAISKLQEAARTNSVDAYKQYSKLIHELNKACNLRGLLKFKEAAVKIPLDEVESASEIVKRFCTGAMSYGSISLEAHTTLATAMNKLGGKSNTGEGGEQPSRMEPLPDGSMNPKRSAIKQVASGRFGVSSYYLTNADELQIKMAQGAKPGEGGELPGHKVIGDIAITRNSTPGVGLISPPPHHDIYSIEDLAQLIHDLKNANPAARISVKLVSEAGVGVVASGVVKGHADHVLISGHDGGTGASRWTGIKNAGLPWELGLAETHQTLVANDLRGRTVLQTDGQLKTGRDVAIAALLGAEEYGFSTAPLITLGCIMMRKCHKNTCPVGIATQDPVLREKFAGEPEHVINFFFMVAEEMREIMSQLGFRTVNEMVGRSDMLEVDREVIKTNEKLENIDLSLLLRPAAELRPEAAQYCVQKQDHGLDMVLDNKLIGLSNAALEKGLPVYIESPICNVNRAVGTMLSHEVTKKYHLDGLPTDTIHVRFTGSAGQSFGAFLCPGVTLELEGDSNDYVGKGLSGGKVVVYPPKQSTFDPKNNIVIGNVALYGATCGEAYFNGMAAERFSVRNSGAKAVVEGVGDHGCEYMTGGIVVVLGSTGRNFAAGMSGGIAYVLDIDGKFQSRCNHELVDLDKVEEEEDITILKMLIQQHQRHTNSVLAKDVLDDFDNLVPKFVKVFPREYKRVLASMKLKEASNDAVEPAAKDEEEQDEAELVEKDAFEELKKLADSSLNGKPSQLADVFEYVLEIEQAETYKRPSQVIDAVKHRGFVAYEREGVQYRDPNVRMSDWNEVMEETKPGPLLKTQSARCMDCGTPFCHQENSGCPLGNKIPEFNELVYQNRWREALDRLLETNNFPEFTGRVCPAPCEGSCVLGIIENPVSIKNIECAIIDKAFEEGWMVPRPPAKRTGKRVAIIGSGPAGLAAADQLNKMGHIVTVYERADRIGGLMMYGVPNMKADKVDTVQRRVNLMAEEGVNFVVNANVGHDPLYSLDRLREENDAIILAVGATKPRDLPAPGRELSGIHFAMEFLHANTKSLLDSNLQDGNYISAEGKKVVVIGGGDTGTDCIGTSIRHGCSSVINLELLPQPPQTRAPGNPWPQWPRIFRVDYGHQEATAKFGKDPRSYEVLTKRFIGDENGVVKGLEVIRVRWEKDETGKFQFKEIEGSEEIIEADLILLAMGFLGPEPTIAEKLGMEQDNRSNFKADYGRFSTTVKGVFAAGDCRRGQSLVVWAISEGRQAAAQVDSYLIKENSEHNISGNPDNLNKRQQDLTKRHQGKHTVAT 2228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0485 2228 MobiDBLite consensus disorder prediction 2198 2228 - -
Lal4g0485 2228 CDD gltB_C 1377 1626 IPR002489 GO:0016491
Lal4g0485 2228 SUPERFAMILY alpha-helical ferredoxin 1709 1866 - -
Lal4g0485 2228 SUPERFAMILY FMN-linked oxidoreductases 587 1350 - -
Lal4g0485 2228 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 102 555 IPR029055 -
Lal4g0485 2228 MobiDBLite consensus disorder prediction 1037 1062 - -
Lal4g0485 2228 Pfam Glutamate synthase central domain 593 881 IPR006982 GO:0006807|GO:0015930
Lal4g0485 2228 Gene3D - 1966 2126 IPR036188 -
Lal4g0485 2228 Gene3D Aldolase class I 570 932 IPR013785 -
Lal4g0485 2228 Pfam Glutamine amidotransferases class-II 102 308 IPR017932 -
Lal4g0485 2228 Pfam Glutamine amidotransferases class-II 323 543 IPR017932 -
Lal4g0485 2228 PRINTS Adrenodoxin reductase family signature 1857 1879 - -
Lal4g0485 2228 PRINTS Adrenodoxin reductase family signature 1880 1893 - -
Lal4g0485 2228 PRINTS Adrenodoxin reductase family signature 1923 1933 - -
Lal4g0485 2228 PRINTS Adrenodoxin reductase family signature 2001 2015 - -
Lal4g0485 2228 Pfam Conserved region in glutamate synthase 948 1317 IPR002932 GO:0006537|GO:0015930|GO:0016638
Lal4g0485 2228 Gene3D - 1856 1965 - -
Lal4g0485 2228 MobiDBLite consensus disorder prediction 19 41 - -
Lal4g0485 2228 Gene3D Aldolase class I 933 1371 IPR013785 -
Lal4g0485 2228 PIRSF GOGAT 23 2222 IPR012220 GO:0005506|GO:0006537|GO:0010181|GO:0016040|GO:0050660
Lal4g0485 2228 PANTHER FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE 79 2198 - -
Lal4g0485 2228 SUPERFAMILY Alpha subunit of glutamate synthase, C-terminal domain 1369 1633 IPR036485 GO:0016491
Lal4g0485 2228 CDD GltS_FMN 950 1329 IPR002932 GO:0006537|GO:0015930|GO:0016638
Lal4g0485 2228 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 102 520 IPR017932 -
Lal4g0485 2228 SUPERFAMILY FAD/NAD(P)-binding domain 1853 2193 IPR036188 -
Lal4g0485 2228 Pfam GXGXG motif 1401 1586 IPR002489 GO:0016491
Lal4g0485 2228 MobiDBLite consensus disorder prediction 19 43 - -
Lal4g0485 2228 Pfam Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 1733 1843 IPR028261 -
Lal4g0485 2228 Gene3D - 1373 1644 IPR036485 GO:0016491
Lal4g0485 2228 PANTHER GLUTAMATE SYNTHASE 1 [NADH], CHLOROPLASTIC 79 2198 - -
Lal4g0485 2228 Gene3D - 1705 1855 IPR009051 GO:0051536
Lal4g0485 2228 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 102 546 IPR029055 -
Lal4g0485 2228 TIGRFAM GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 1711 2196 IPR006005 GO:0006537|GO:0016639
Lal4g0485 2228 CDD GltS 102 538 - -
Lal4g0485 2228 Pfam Pyridine nucleotide-disulphide oxidoreductase 1856 2182 IPR023753 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0485 Lal-Chr4 3441178 3453907 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0485 K00264 - gmx:100815931 3907.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0485 4 3441178 3453907 Lal4g0485 4 3441178 3453907 ECH
Lal17g0556 17 3918625 3933247 Lal4g0485 4 3441178 3453907 LSH