Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0411 ATGGAAGAGAGCGTCATTTTTCAATGGAGTGTTATCAGATCTGTGTTGTCAATCCTTCAATGGTGGGCTTTCAATGTCACTGTTATCATCGTTAACAAGTGGATCTTCCAGAAATTGGATTTTAAGTTTCCCCTATCAGTCTCCTGTGTCCACTTTATTTGCTCATCTATAGGAGCATATGTGGTAATTAAGGTGCTGAAGGTTAAACCACTGATAAATGTTGGCCCTGAAGATCGCTGGAGAAGAATCTTCCCAATGTCATTGGTGTTCTGTATTAACATAGTTCTAGGAAATGTGAGCCTACGTTACATTCCAGTTTCGTTTATGCAGACTATAAAGTCATTCACACCTGCAACCACTGTTATTTTGCAATGGCTAGTGTGGAGGAAGTATTTTGACTGGCGTATTTGGGCTTCTCTCATACCTATTGTTGGAGGGATTCTTCTTGCATCTGTAACAGAGCTTAGTTTTAATATGTTTGGATTTTGTGCCGCCTTAGTTGGCTGTTTGGCTACATCTACGAAGACTATCCTCGCGGAATCTCTTCTACATGGATACAAATTTGACAGGAGTATGAAATCTTTTATTGTTGTAGCTAAGCAATCCGTGTCTTGGACTCTTAGCTTGTATGGAAACATTTCTGATCAGCATATGCTAAGCATAAACACAGTTTATTACATGGCACCTTTTGCAACCATGATCTTGGCACTTCCTGCTATGTTACTTGAAGGCAACGGAATTATTGAGTGGTTCAATACTCATCCATATCCTTGGTCAGCCCTCAGCATTATTTTTAGCTCTGGCGTTTTGGCTTTCTGCCTTAACTTCTCCATCTTCTATGTCATTCACTCTACCACTGCTGTAACGTTTAATGTCGCTGGAAACCTTAAGGTTGCAGTTGCTGTCCTAGTTTCATGGATGATATTTAGGAATCCGATATCATATTTAAATGCTGTTGGATGTGCCGTGACTCTTGTTGGATGTACATTCTATGGTTATGTAAGGAACATGCTCTCCCAACAACCACCAGTTCCAGGAACTCCTCAGACACCAAGAACCCCTCGCAGTAAGACGGAGTTGCTTCCTCTTGTAAATGATAAATTAGAAGATAGGCTCTAA 1119 0.4057 MEESVIFQWSVIRSVLSILQWWAFNVTVIIVNKWIFQKLDFKFPLSVSCVHFICSSIGAYVVIKVLKVKPLINVGPEDRWRRIFPMSLVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVILQWLVWRKYFDWRIWASLIPIVGGILLASVTELSFNMFGFCAALVGCLATSTKTILAESLLHGYKFDRSMKSFIVVAKQSVSWTLSLYGNISDQHMLSINTVYYMAPFATMILALPAMLLEGNGIIEWFNTHPYPWSALSIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWMIFRNPISYLNAVGCAVTLVGCTFYGYVRNMLSQQPPVPGTPQTPRTPRSKTELLPLVNDKLEDRL 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0411 372 PANTHER SOLUTE CARRIER FAMILY 35 2 191 - -
Lal4g0411 372 PANTHER SOLUTE CARRIER FAMILY 35 218 357 - -
Lal4g0411 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 76 152 - -
Lal4g0411 372 Pfam Triose-phosphate Transporter family 16 331 IPR004853 -
Lal4g0411 372 PANTHER GDP-MANNOSE TRANSPORTER GONST5 2 191 - -
Lal4g0411 372 PANTHER GDP-MANNOSE TRANSPORTER GONST5 218 357 - -
Lal4g0411 372 Gene3D - 49 156 - -
Lal4g0411 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0411 Lal-Chr4 2856361 2859983 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0411 1 372 Organic Solute Cotransporters AT1G77610 79.357 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0411 K15285 - gmx:100778350 618.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0411 4 2856361 2859983 Lal4g0411 4 2856361 2859983 ECH
Lal17g0467 17 3213940 3217721 Lal4g0411 4 2856361 2859983 LSH