Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0467 ATGGAAGAGGGCGTGATTTTCCACTGGAATGTTTTCAGATCTATCTTGTCCATCTTTCAATGGTGGGCTTTCAATGTTACTGTTATCATCGTTAACAAGTGGATCTTCCAGAAATTGGATTTCAAGTTTCCTTTGTCAGTCTCAGGTATCCACTTTATTTGCTCATCTGTTGGAGCATATGTGGTAATTAAGGTGCTGAAGATTAAACCACTGATAACTGTTGACCCCGAAGATCGCTGGAGAAGAATCTTCCCAATGTCATTTGTGTTCTGTATTAACATAGTGCTTGGGAACGTGAGCCTAAGATACATTCCTGTTTCTTTTATGCAAACGGTAAAGTCCTTCACACCTGCAACCACTGTTGTTTTGCAATGGCTAGTGTGGAGGAAGTATTTTGAGTGGCGTATTTGGGCTTCTCTTATTCCAATTGTTGGAGGGATTCTTCTTGCTTCTGTAACAGAGCTTAGTTTTAATATATTTGGATTTTGTGCCGCCTTAGTTGGCTGTTTGGCTACATCTACAAAGACCATCCTGGCAGAATCTCTTCTACATGGATACAAATTTGACAGTATAAACACAGTTTATTATATGGCACCTTTTGCAACCATGATCTTGGCACTTCCTGCTATGTTACTTGAAGGCAATGGAATTCTTGAGTGGTTCAATACCCATCCATATCCTTGGTCAGCCCTCATCATTATTTTTAGCTCTGGTGTTTTGGCTTTCTGCCTTAACTTCTCCATCTTTTATGTCATTCACTCCACCACTGCTGTAACTTTTAACGTCGCTGGAAATCTTAAGGTTGCAGTTGCTGTCCTTGTTTCATGGATGATATTTAGGAACCCAATTTCATATTTAAATGCTGTTGGATGTGCTGTTACTCTTGTGGGATGTACATTCTATGGTTATGTAAGGCACATGCTCTCTCAACAACCACAACTACCAGGAACTCCTAGGACACCAAGAACCCCTAGGAATAAAATGGAGTTGCTTCCTCTTGTAAATGATAAATTAGAAGATAAGCTCTAA 1029 0.3984 MEEGVIFHWNVFRSILSIFQWWAFNVTVIIVNKWIFQKLDFKFPLSVSGIHFICSSVGAYVVIKVLKIKPLITVDPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTVKSFTPATTVVLQWLVWRKYFEWRIWASLIPIVGGILLASVTELSFNIFGFCAALVGCLATSTKTILAESLLHGYKFDSINTVYYMAPFATMILALPAMLLEGNGILEWFNTHPYPWSALIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWMIFRNPISYLNAVGCAVTLVGCTFYGYVRHMLSQQPQLPGTPRTPRTPRNKMELLPLVNDKLEDKL 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0467 342 PANTHER GDP-MANNOSE TRANSPORTER GONST5 1 329 - -
Lal17g0467 342 SUPERFAMILY Multidrug resistance efflux transporter EmrE 218 300 - -
Lal17g0467 342 Pfam Triose-phosphate Transporter family 17 301 IPR004853 -
Lal17g0467 342 SUPERFAMILY Multidrug resistance efflux transporter EmrE 71 152 - -
Lal17g0467 342 PANTHER SOLUTE CARRIER FAMILY 35 1 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0467 Lal-Chr17 3213940 3217721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0467 1 342 Organic Solute Cotransporters AT1G21870 86.297 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0467 K15285 - gmx:100817042 644.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0467 17 3213940 3217721 Lal17g0467 17 3213940 3217721 ECH
Lal17g0467 17 3213940 3217721 Lal4g0411 4 2856361 2859983 LSH