Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0405 ATGGGCAAAGACACCAACCTAAGATCTGGAACTGCAATGACTCTGTTGTTGTTGTTGTTGTTGTTGTCCTTCACAACTTTTCTCGTCCCTAAAGCTGAGGCCATATGGTTAACCATTCCCAATTCAGGAACTAAGTGTTTGTCTGAGGAAATCCAAACACATGTTGTCGTTTTAGCAGATTACTATGTTGTAGCTGATGATGTTAGTGAGACTCACCAGCTTCACACTATTTCTGCCAAGGTGACATCTCCTTATGGAAATAATCTTCACCACAATGAAAATGTGACCCGCGGTCAATTTGCATTTACAACTATGGAGAGTGGGAACTATGTGGCATGCTTTTGGTTGGAAAGCAAACATCAAGGAAGTGCAACGGTTAGCCTTGAATGGAAAACTGGAATTTCTGCCAAAGATTGGGAAACCGTAGCGAAAAAAGAAAAGATTGAGGGTGTTGAACTTGAGCTAAGGAAACTTGAAGGAGCTGTGGAAGCCATCCATGATAATCTACTGTATTTGAAGAACAGGGAAGCAGAGATGAGGGAAGTTAGTGAAGCAACAAATGGTAGAGTAGCTTGGTTCAGTATCATGTCTCTAGGTGTCTGCATTTCGGTTTCGGGGTTGCAGCTGTGGTATTTGAAGAACTTCTTTAGGAAGAAGAAGCTCATATAG 669 0.4185 MGKDTNLRSGTAMTLLLLLLLLSFTTFLVPKAEAIWLTIPNSGTKCLSEEIQTHVVVLADYYVVADDVSETHQLHTISAKVTSPYGNNLHHNENVTRGQFAFTTMESGNYVACFWLESKHQGSATVSLEWKTGISAKDWETVAKKEKIEGVELELRKLEGAVEAIHDNLLYLKNREAEMREVSEATNGRVAWFSIMSLGVCISVSGLQLWYLKNFFRKKKLI 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0405 222 PANTHER EMP24/GP25L/P24 FAMILY PROTEIN 8 222 - -
Lal4g0405 222 ProSiteProfiles GOLD domain profile. 44 157 IPR009038 -
Lal4g0405 222 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 8 222 IPR015720 -
Lal4g0405 222 SMART EMP24_GP25L_2 34 217 IPR009038 -
Lal4g0405 222 Coils Coil 148 168 - -
Lal4g0405 222 Pfam emp24/gp25L/p24 family/GOLD 36 217 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0405 Lal-Chr4 2817694 2820742 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0405 K20352 - gmx:100500676 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0405 4 2817694 2820742 Lal4g0405 4 2817694 2820742 ECH
Lal17g0463 17 3180889 3183286 Lal4g0405 4 2817694 2820742 LSH