Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0463 ATGGCCAAAGACATGAACCTAAGATCTGAAACTCCAATGACTCTGTTCCTGATCTTGTTGTTATCCTTAACCACTTTTCTGTTCCCTCAAACTGAGGCCATATGGTTAACCATACCAACTTCAGGACCTAAGTGTTTGTCAGAAGAAATTCAGACACACGTTGTAGTTATAGCTGATTACTATGTTGTGGCTGTTGATACTGAGGGTCACCAGCTTCATACTATTTCTGTCAAGACGTGGTGCATCACTTGTGCCTCTACACTCTTCCGGTGGTTGGAGGCTCCTGATCGCAGTCCGGTGACATCTCCTTATGGAAATAATCTTCACCACAATGAAAATGTTACTCACGGTCAGTTTGCATTTACAACTACAGAGAGTGGGAACTATGTGGCGTGCTTTTGGGTTGAAGGTAATCATCAAGGAAGCGCAACGATTAGCCTTGAATGGAGAACTGGAATTTCTGCCAAGGATTGGGATGCTGTTGCTAAAAAAGAAAAGATTGAGGGTGTTGAACTTGAGCTAAGGAAACTTGAAGGAGTTGTGGATGCCATCCATGAGAATCTAGTTTACTTGAAGACTAGGGAAGCAGAAATGAGGGAAGTTAGTGAAGCAACAAATGGTAGAGTAGCTTGGTTCAGTATCATGTCTCTTGGTGTCTGCATTTCAGTTTCTGGGTTGCAGTTGTGGTATCTGAAGCGCTTCTTTAGGAAGAAGAAGCTCATATAG 726 0.4284 MAKDMNLRSETPMTLFLILLLSLTTFLFPQTEAIWLTIPTSGPKCLSEEIQTHVVVIADYYVVAVDTEGHQLHTISVKTWCITCASTLFRWLEAPDRSPVTSPYGNNLHHNENVTHGQFAFTTTESGNYVACFWVEGNHQGSATISLEWRTGISAKDWDAVAKKEKIEGVELELRKLEGVVDAIHENLVYLKTREAEMREVSEATNGRVAWFSIMSLGVCISVSGLQLWYLKRFFRKKKLI 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0463 241 Coils Coil 160 187 - -
Lal17g0463 241 ProSiteProfiles GOLD domain profile. 43 176 IPR009038 -
Lal17g0463 241 SMART EMP24_GP25L_2 33 236 IPR009038 -
Lal17g0463 241 Pfam emp24/gp25L/p24 family/GOLD 35 236 IPR009038 -
Lal17g0463 241 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 99 241 IPR015720 -
Lal17g0463 241 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 13 78 IPR015720 -
Lal17g0463 241 PANTHER EMP24/GP25L/P24 FAMILY PROTEIN 13 78 - -
Lal17g0463 241 PANTHER EMP24/GP25L/P24 FAMILY PROTEIN 99 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0463 Lal-Chr17 3180889 3183286 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0463 K20352 - gmx:100500676 320.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0463 17 3180889 3183286 Lal17g0463 17 3180889 3183286 ECH
Lal17g0463 17 3180889 3183286 Lal4g0405 4 2817694 2820742 LSH