Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0403 ATGGATAAACCAAAACTCACTAGAACCCAATCCTCTCTCCTTCGTTCTTCTCCAACAATCCGATCCTCTATTTACAGTCTCTCTTCAATTAATGAAGATGATTTCAATAACAACGTCGTTGAGGATGATGATAAGAAAAACAAAACCATCAACAAGAAAACCGGTCTAATAACGAACCCGGTTCTCGCTTTTGCTTCATTGGGTTTCTTCACTTCGTGTCTCTTTTTTTACCTATACTACTTCTTCTACTCTGTACCCACTTCAGAGAATGTTCTTTTCGCGTTGATCTTCATCGCTGTGGCACTTTACTTTACATCCAAAAACAAAGGCTTAATCAATCACTCGTTCTCATCAATAAAGCACTCATGGGATGAGAACTTAAAAAGGTTCGGTTTTTCCAAGACCCAATCAAAACCGGTTCAGTGGGTCATCGGCGATAACACCGATACGGAGTCCGGTTCAGTAAAGAAGAAGAACAAGATGATAAAAGAAGGGGTTGAGTTTTACAGCAATGGTGATTTCTACGAGGGTGAGTTTCATAGAGGGAGGAGCAATGGGAGTGGGGTGTATAACTACTTCGTGAATGGAAGATATGAAGGGGATTGGGTTGATGGAAGATATGATGGGTATGGAATTGAAAGCTGGAGTAGAGGGAGTAAATATAGAGGGCAATATAGACAAGGTTTGAGACATGGTTATGGTGTTTATAGGTTCTACACTGGGGATTCTTATGCTGGTGAATGGTGTAATGGTCAGAGTCATGGTGTTGGAGTTCAAACTTGCTCTGATGGGAGTTGCTTTATTGGGGAGTTTAAGTTTGGTGTTAAGCATGGACTTGGCTGTTACCATTTTAGAAATGGAGATAGATATGCTGGAGAATATTTTGGAGACAAAATACATGGATTTGGGATCTACCGTTTTGCCAATGGCCACTGTTATGAGGGTGCATGGCATGAGGGCCGTAGGCAAGGTATCGGCACCTATACTTTCCGAACCGGTGACCGAAAATGTGGCGAATGGGATGCTGGAAATCTCAAGCATCCTTTACCACCAAAAACAGACGTTGCCCTTAGAGCAGTTCAGGCTGCTAGGAAAACAGCAGAATGTGCTATAAACTTAAGGCGCGTGGATGACCAGGTGAACAAAGCAGTTATCGCTGCTAACCGGGCTGCTACCGCTGCTAGAGTTGCTGCTGTAAAAGCAGTTCAAAACAGGATGGATGGAAAATTTTGCGATACTGATGTCTAA 1248 0.4263 MDKPKLTRTQSSLLRSSPTIRSSIYSLSSINEDDFNNNVVEDDDKKNKTINKKTGLITNPVLAFASLGFFTSCLFFYLYYFFYSVPTSENVLFALIFIAVALYFTSKNKGLINHSFSSIKHSWDENLKRFGFSKTQSKPVQWVIGDNTDTESGSVKKKNKMIKEGVEFYSNGDFYEGEFHRGRSNGSGVYNYFVNGRYEGDWVDGRYDGYGIESWSRGSKYRGQYRQGLRHGYGVYRFYTGDSYAGEWCNGQSHGVGVQTCSDGSCFIGEFKFGVKHGLGCYHFRNGDRYAGEYFGDKIHGFGIYRFANGHCYEGAWHEGRRQGIGTYTFRTGDRKCGEWDAGNLKHPLPPKTDVALRAVQAARKTAECAINLRRVDDQVNKAVIAANRAATAARVAAVKAVQNRMDGKFCDTDV 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0403 415 Gene3D - 250 295 - -
Lal4g0403 415 Gene3D - 205 249 - -
Lal4g0403 415 Gene3D - 156 204 - -
Lal4g0403 415 Gene3D - 296 356 - -
Lal4g0403 415 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 215 343 - -
Lal4g0403 415 Pfam MORN repeat 267 289 IPR003409 -
Lal4g0403 415 Pfam MORN repeat 313 335 IPR003409 -
Lal4g0403 415 Pfam MORN repeat 175 192 IPR003409 -
Lal4g0403 415 Pfam MORN repeat 198 219 IPR003409 -
Lal4g0403 415 Pfam MORN repeat 244 265 IPR003409 -
Lal4g0403 415 Pfam MORN repeat 290 311 IPR003409 -
Lal4g0403 415 Pfam MORN repeat 221 242 IPR003409 -
Lal4g0403 415 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 13 408 - -
Lal4g0403 415 SMART morn 311 332 IPR003409 -
Lal4g0403 415 SMART morn 242 263 IPR003409 -
Lal4g0403 415 SMART morn 173 195 IPR003409 -
Lal4g0403 415 SMART morn 196 217 IPR003409 -
Lal4g0403 415 SMART morn 219 240 IPR003409 -
Lal4g0403 415 SMART morn 265 286 IPR003409 -
Lal4g0403 415 SMART morn 288 309 IPR003409 -
Lal4g0403 415 PANTHER RADIAL SPOKE HEAD 10 HOMOLOG B-LIKE 13 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0403 Lal-Chr4 2802000 2804450 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0403 170 345 Acyl Lipid Metabolism Gene Families AT1G21980 35.795 2.58e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0403 - - jre:108988356 598.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0403 4 2802000 2804450 Lal4g0403 4 2802000 2804450 ECH
Lal17g0460 17 3156657 3160129 Lal4g0403 4 2802000 2804450 LSH