Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0460 ATGGAACAATCCAAACTCACCAGAACCCAATCCTCGCTTCTTCGTTCTGGAACAATCCGATCCTCAATTCATAGCCTTTCTTCAATCAACGAAGATGATTTCAATAACGACGTCGTTCAAGACGACGACGATGACAAGAACTACAAGAAGAAAAAAACCAACAAAAACAAGAAACCCGGTTCCACTCCGCGATATCGAACCGGGTTCGTTACAACCCCGGTTCTTGCTGTTGCATTGTTCGGTTTGTTCAGCGCGTGTTCTCTCTTCCTCTACCTCTTTTACTTCTTCTTCTACGCGGTACCAACATCAGAGAACGTGTTACTCGCGTTGATCTTTATCGCCGTCGCGCTTTACTTTGCATCTAAAAACAAACGCCTAATCAACCGTACGCTCTCGTCACTAAAACACTCTTGGGAAGAAACCTTGAAAAAAACCGGTTTTCCGAAAACCCATTCAAAGCCGGTTCAATGGGTCATCGGCGATAACACCGATACAGAATCCGGTTCAGTAAAGAAAACCAACAAGGTGATAAAAGAAGGTGTAGAGTTTTACAGCAATGGTGATTTCTACGAGGGTGAGTTTCACAGAGGAAGGAGCAATGGGAGTGGGGTTTATAACTATTTCGTGAATGGAAGATACGAAGGTGATTGGGTTGATGGAAGGTATGATGGGTATGGAATTGAAAGCTGGAGTAGAGGGAGTAGATATAGGGGGCAATATAGACAAGGGTTGAGGCATGGTTATGGAGTTTATAGATTCTACACTGGGGATACTTATTCTGGTGAATGGTGTAATGGTCAGAGTCATGGTGTTGGTGTTCAAACTTGTTCTGATGGGAGTTGCTATATTGGGGAGTTTAAGTTTGGTGTTAAACATGGACTTGGTTGTTACCATTTTAGAAATGGAGATAGATATACTGGAGAGTATTTTGGAGACAAAATACATGGATTTGGGATTTACCACTTTGCCAATGGCCACTATTATGAGGGAGCATGGCATGAGGGCCGAAGGCAAGGTATTGGCACCTATACTTTTCGATCTGGTGACCGAAGATGTGGCGAATGGGATGCTGGAAACCTCAAGCACCCTATACCACCAATAACTGATGTTGCCCTTCGAGCAGTTCAGTCTGCAAGAAAAACAGCGGAGAATGCTATAAACTTGAGGCGCGTGGATGACCATGTAAATAAAGCAGTAATTGCTGCCAATATGGCTGCCACTGCTGCTAGAGTTGCTGCTGTGAAAGCAGTTCAAAACAGGATGGATGGGAAATTTTGTGATATTGATGTTTAA 1293 0.4354 MEQSKLTRTQSSLLRSGTIRSSIHSLSSINEDDFNNDVVQDDDDDKNYKKKKTNKNKKPGSTPRYRTGFVTTPVLAVALFGLFSACSLFLYLFYFFFYAVPTSENVLLALIFIAVALYFASKNKRLINRTLSSLKHSWEETLKKTGFPKTHSKPVQWVIGDNTDTESGSVKKTNKVIKEGVEFYSNGDFYEGEFHRGRSNGSGVYNYFVNGRYEGDWVDGRYDGYGIESWSRGSRYRGQYRQGLRHGYGVYRFYTGDTYSGEWCNGQSHGVGVQTCSDGSCYIGEFKFGVKHGLGCYHFRNGDRYTGEYFGDKIHGFGIYHFANGHYYEGAWHEGRRQGIGTYTFRSGDRRCGEWDAGNLKHPIPPITDVALRAVQSARKTAENAINLRRVDDHVNKAVIAANMAATAARVAAVKAVQNRMDGKFCDIDV 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0460 430 Gene3D - 220 264 - -
Lal17g0460 430 Gene3D - 265 310 - -
Lal17g0460 430 Gene3D - 172 219 - -
Lal17g0460 430 Gene3D - 311 368 - -
Lal17g0460 430 Pfam MORN repeat 328 350 IPR003409 -
Lal17g0460 430 Pfam MORN repeat 213 235 IPR003409 -
Lal17g0460 430 Pfam MORN repeat 305 326 IPR003409 -
Lal17g0460 430 Pfam MORN repeat 190 207 IPR003409 -
Lal17g0460 430 Pfam MORN repeat 282 304 IPR003409 -
Lal17g0460 430 Pfam MORN repeat 236 258 IPR003409 -
Lal17g0460 430 Pfam MORN repeat 259 280 IPR003409 -
Lal17g0460 430 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 13 424 - -
Lal17g0460 430 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 13 424 - -
Lal17g0460 430 SMART morn 188 210 IPR003409 -
Lal17g0460 430 SMART morn 211 232 IPR003409 -
Lal17g0460 430 SMART morn 280 301 IPR003409 -
Lal17g0460 430 SMART morn 326 347 IPR003409 -
Lal17g0460 430 SMART morn 234 255 IPR003409 -
Lal17g0460 430 SMART morn 303 324 IPR003409 -
Lal17g0460 430 SMART morn 257 278 IPR003409 -
Lal17g0460 430 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 230 358 - -
Lal17g0460 430 MobiDBLite consensus disorder prediction 37 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0460 Lal-Chr17 3156657 3160129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0460 186 360 Acyl Lipid Metabolism Gene Families AT1G21980 37.714 5.68e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0460 - - jre:108988356 573.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0460 17 3156657 3160129 Lal17g0460 17 3156657 3160129 ECH
Lal17g0460 17 3156657 3160129 Lal4g0403 4 2802000 2804450 LSH