Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0402 ATGCAACTAACGTGTAATTGCACGCAACAACCAATGAGATTCACACCTTCCTTCAAATTCCTCACTTTTTCAAAGTATTCCCATAGTTTCATTCACCCTTCTTCTTCTTCTTCCACTTCTACCTCAAAGTTCACACCTTTCATTTCATCCACCATGTCCACTGTTTCAAACAATCATAATGACGTCACCACTACCCAGATAAAGCAGCACCCTTTGCAGGTTGCAAAGCGCTTAGAGAAGTTCAAAACAACAATTTTCACTCAAATGAGTATGCTTGCTGTCAAATATGGAGCCATAAACCTTGGTCAAGGCTTTCCAAACTTTGATGGTCCCGAGTTTGTAAAGGAAGCAGCAATACAGGCAATCAGGGATGGGAAAAACCAGTATGCCCGGGGCTATGGAGTTCCAGACTTGAACAATGCCATTGCTGAGAGATTTCAGAAAGATACTGGACTTGTGGTCGACCCTGAAAAGGAAATTACAGTTACAAGTGGGTGCACAGAAGCAATTGCTGCTACTATATTAGGATTAATAAATCCTGGTGATGAGGTTATCGTATTTGCTCCTTTCTATGATTCTTATGAAGCCACTTTATCCATGGCTGGTGCAAAAGTAAAAAGCATCACCTTGCGCCCTCCGGATTTTGCTGTCCCAATTGAGGAATTGAAATCCGCCATCTCAAAGAATACCCGTGCCATTATGATAAATACTCCTCACAACCCTACTGGAAAGATGTTCACTCGAGAGGAGTTCAATACCATTGCATCTCTTTGCATTGAGAATGATGTTCTGGTTTTCAGCGATGAAGTTTATGATAAGTTGGCATTTGATATGGAGCACATTTCAGTGGCTTCTTTGCCTGGAATGTTCGAAAGGACAGTGACAATGAACTCCTTGGGGAAGACGTTCTCTTTAACAGGATGGAAGATTGGGTGGGCCATAGCACCCCCACACCTAACATGGGGAGTGAGACAGGCACACTCTTACCTTACTTTCGCGACCTCGACTCCTATGCAGTCGGCAACTGCAGCAGCTCTTAGAGCACCAGATTCTTACTTTGTGGAACTAAAGAGGGATTATATGGCAAAGAGGGCGATCTTGGTGGAAGGATTGGAGGCTGTTGGCTTCAAGGTATTCCCATCCAATGGAACCTACTTCGTGGTTGTGGATCACACACCTTTTGGACAGGAAAATGATGTTGCATTTTGTGAATATCTAATTAAGGAGGTCGGAGTGGTGGCAATACCTACTAGTGTGTTTTATTTGAATCCGGAAGATGGAAAGAATCTAGTGAGGTTTACTTTCTGCAAGGATGAGGGAACTCTTAGGGCCGCCGTGGAGAGGATGAAAGAGAAGCTTAGACATGATTCCAATGCATGA 1380 0.4348 MQLTCNCTQQPMRFTPSFKFLTFSKYSHSFIHPSSSSSTSTSKFTPFISSTMSTVSNNHNDVTTTQIKQHPLQVAKRLEKFKTTIFTQMSMLAVKYGAINLGQGFPNFDGPEFVKEAAIQAIRDGKNQYARGYGVPDLNNAIAERFQKDTGLVVDPEKEITVTSGCTEAIAATILGLINPGDEVIVFAPFYDSYEATLSMAGAKVKSITLRPPDFAVPIEELKSAISKNTRAIMINTPHNPTGKMFTREEFNTIASLCIENDVLVFSDEVYDKLAFDMEHISVASLPGMFERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSYLTFATSTPMQSATAAALRAPDSYFVELKRDYMAKRAILVEGLEAVGFKVFPSNGTYFVVVDHTPFGQENDVAFCEYLIKEVGVVAIPTSVFYLNPEDGKNLVRFTFCKDEGTLRAAVERMKEKLRHDSNA 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0402 459 PANTHER FI04487P 74 454 - -
Lal4g0402 459 Gene3D - 111 349 IPR015421 GO:0003824
Lal4g0402 459 PANTHER FI04487P 74 454 - -
Lal4g0402 459 Gene3D Aspartate Aminotransferase, domain 1 88 449 IPR015422 GO:0003824
Lal4g0402 459 SUPERFAMILY PLP-dependent transferases 74 453 IPR015424 -
Lal4g0402 459 Pfam Aminotransferase class I and II 99 448 IPR004839 GO:0009058|GO:0030170
Lal4g0402 459 CDD AAT_like 99 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0402 Lal-Chr4 2786814 2789632 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0402 K23977 - gmx:100814682 734.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0402 4 2786814 2789632 Lal4g0402 4 2786814 2789632 ECH
Lal17g0459 17 3147768 3150425 Lal4g0402 4 2786814 2789632 LSH