Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0459 ATGCGATTCATAAATTCTTCATTCAAATTCCTCTGTTTTTCAAAGCATTTCATTACCTCTTCTACCCCAAAGTTCTCACCTTTCATTGCAGCCACCATGTCCACTGTTTCCAACACTCATAATGACGTCACCATCACCCAGATAAAGCAGCACCCTTTGCAGGTTGCAAAGCGCTTAGAGAAGTTCAAAACAACTATCTTCACTCAAATGAGTATGCTTGCTGTCAAACATGGAGCCATAAACCTTGGTCAAGGCTTTCCAAACTTTGACGGTCCAGACTTTGTGAAGGAAGCGGCAATTCAGGCAATCAAGGGTGGGAAAAACCAGTATGCCCGGGGTTATGGAGTTCCAGACTTAAACAATGCCATTGCTGAGAGATTTAAGAAAGACACTGGACTTGTGGTGGATCCTGAGAAGGAAATTACTGTTACAAGTGGCTGCACAGAAGCAATTGCTGCAACTATATTAGGATTAATAAACCCTGGTGACGAGGTTATCCTATTTGCTCCTTTTTATGATTCTTATGAAGCCACTTTATCCATGGCTGGTGCGAAAGTTAAAAGCATCACTTTGCGCCCTCCGGATTTTGCTGCCCCAATTGAGGAATTAAAGTCCGCCATCTCAAAGAATACACGCGCCATTTTGATAAATACTCCTCACAACCCTACTGGAAAGATCTTCACTCAAGAGGAGCTTAATTCCATTGCGTCTCTTTGCATTGAGAATGATGTTCTGGTTTTTAGTGATGAAGTTTATGATAAGCTGGCATTTGATATGGAACACATTTCACCGGCTTCTTTGCCTGGAATGTTCGAAAGGACGGTGACAATGAACTCCTTGGGGAAGACATTCTCTTTAACAGGATGGAAGATTGGGTGGGCCATAGCACCCCCACACTTAACATGGGGACTGAGACAGGCACATTCTTTTCTCACTTTTGCAACCTCTACTCCTATGCAGTCTGCAGCCGCAGCAGCTCTCAGAGCACCCGATTCTTATTTTGTTGAGCTAAAGAGGGATTATATGGCAAAGAGGGCTATTTTGGTGGAAGGGCTTGAGGCCGTTGGCTTCAAGGTATTCCCATCCAATGGAACCTACTTCGTGGTTGTGGATCACACACCTTTTGGACACAAAAATGATGTTGCATTTTGTGAATATCTAATTAAGGAGGTAGGAGTGGTGGCAATCCCTACCAGTGTGTTTTACTTGAATCCAGAAGATGGAAAGAATCTAGTCAGGTTTACTTTCTGCAAGGATGAGGGAACTCTTAGGGCTGCAGTTGAAAGGATGAAAGAAAAGCTTAGAAAATGA 1311 0.4325 MRFINSSFKFLCFSKHFITSSTPKFSPFIAATMSTVSNTHNDVTITQIKQHPLQVAKRLEKFKTTIFTQMSMLAVKHGAINLGQGFPNFDGPDFVKEAAIQAIKGGKNQYARGYGVPDLNNAIAERFKKDTGLVVDPEKEITVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKVKSITLRPPDFAAPIEELKSAISKNTRAILINTPHNPTGKIFTQEELNSIASLCIENDVLVFSDEVYDKLAFDMEHISPASLPGMFERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGLRQAHSFLTFATSTPMQSAAAAALRAPDSYFVELKRDYMAKRAILVEGLEAVGFKVFPSNGTYFVVVDHTPFGHKNDVAFCEYLIKEVGVVAIPTSVFYLNPEDGKNLVRFTFCKDEGTLRAAVERMKEKLRK 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0459 436 Pfam Aminotransferase class I and II 80 429 IPR004839 GO:0009058|GO:0030170
Lal17g0459 436 PANTHER FI04487P 55 436 - -
Lal17g0459 436 CDD AAT_like 80 432 - -
Lal17g0459 436 Gene3D Aspartate Aminotransferase, domain 1 69 430 IPR015422 GO:0003824
Lal17g0459 436 PANTHER FI04487P 55 436 - -
Lal17g0459 436 Gene3D - 92 330 IPR015421 GO:0003824
Lal17g0459 436 SUPERFAMILY PLP-dependent transferases 55 435 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0459 Lal-Chr17 3147768 3150425 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0459 K23977 - gmx:100818968 732.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0459 17 3147768 3150425 Lal17g0459 17 3147768 3150425 ECH
Lal17g0459 17 3147768 3150425 Lal4g0402 4 2786814 2789632 LSH