Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0399 ATGGATGCGGTGGAGGGAAGGGCGGCGACGGTTTTTGGTAGTTTGAGGAAGGTCAACTTTTGTGAGCTTCCCATTGGTACAGTTTGTGTTGCTGATGTTTATGATATCACAGAGGCAGTGAAGGATATCTGTGAAAGAAATGGATTACCCTACATTGATGTTAGAATCAAGTGGCAAAATGACCTTTACTTAAATGGCTTTAAAGTAGGAGGCGTTCTATGCACCTCAAACTATAAATCAAAGAAGTTCAATGTCAGTGCAGGTAATAAGACATTCTTGGGTAGCAAATTCTATTCAATGGCGACTGACTGCATTTCCATTGAGATTAAAGTTGTTGTTGATGGAGATGGAGATCATAACACATTCCGTGCTTTCACATCATCTATATTTGGAAAATGGCATGCAGTGGACAGAGTTATTGTACAGGAAAAGAATGAAGATAAAGTGGTTGAGCATGTGGTAACTGTACAGGTATGGCAGATCAAATCTGTTTCTACTGAATTAATTTTGGGCAGAGTTCTTATCAAGTTTGCTTAA 537 0.3911 MDAVEGRAATVFGSLRKVNFCELPIGTVCVADVYDITEAVKDICERNGLPYIDVRIKWQNDLYLNGFKVGGVLCTSNYKSKKFNVSAGNKTFLGSKFYSMATDCISIEIKVVVDGDGDHNTFRAFTSSIFGKWHAVDRVIVQEKNEDKVVEHVVTVQVWQIKSVSTELILGRVLIKFA 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0399 178 Pfam Biotin/lipoate A/B protein ligase family 36 88 IPR004143 GO:0036211
Lal4g0399 178 Gene3D Bira Bifunctional Protein; Domain 2 12 127 IPR045864 -
Lal4g0399 178 SUPERFAMILY Class II aaRS and biotin synthetases 38 81 IPR045864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0399 Lal-Chr4 2766751 2773832 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0399 K01942 - gmx:100818402 128.642
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0399 4 2766751 2773832 Lal4g0399 4 2766751 2773832 ECH
Lal21g0506 21 3627178 3632624 Lal4g0399 4 2766751 2773832 LSH