Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0397 ATGCGCGAAGCACTTGTACCTGATTACTCAACACCAACAGATTCAAACAAAGACACTCACAACAACCAAAACCCATCTCAACCGGTTCACTTACCCGGTCGGACCCGATCCCAAACCGGAATTCGAAAAGTTACTCCCACAACTGAACCGGACGTAACAGTAGAAGAAGTTTTACCCAACGGTGACTACTACATGGGTTCGTTTTTGTTCAACGCGCCGCACGGTTCAGGCAAATATCTCTGGACCGATGGGTGCATGTACGAAGGAGAATGGAAGCGTGGAAAAGCTTCTGGTAAAGGCAAATTCTCATGGCCATCGGGGGCAACGTACGAAGGTGAATTCAAATTGGGTCGAATTGAAGGGTTCGGAATGTTTATTGGTTCAGACGGTGACACGTACCGTGGGTGCTGGAGTTTCGATAAGAAAAACGGTTATGGTCAGAAACGTTACGTGAACGGTGATTTATATGAAGGGAATTGGAAGAAGAATGTGCAAGATGGTGAGGGTAGGTATGTTTGGAAGAACGGGAATGAGTACTTTGGGGAGTGGAGGAACGGTGTTATTTGTGGGAATGGGGTTTTGATTTGGTCCAACGGGAACCGTTACGAAGGGAAATTTGAGAACGGTGTTGCGAAAGGGCAAGGGATTTTTACTAGGTCTGATGGAAGCTGTTATGTTGGGATTTGGAATAAGGATTTGAAGATTCAGAATTTGAATGGGAATGATAAGTTTTTGGATTTGAATGGTAGTGATAAGTGTTTGGGTGTGGCTGAGAAGAATGTTCCGCGGATTTATATTTGGGAATCGGAGAGTGAAACCGGTGATATAACTTGTGATGTTATTAATAATGTGCCATTGTTGTATAAAGAAGCTGCAATTGAAACCGTATCGGATCATAAAGAGATTAATCAGTTTCAGAGGAATCCTATTTGTTTTTCTAATGAGGTGAAAAGACCTGGGGGGATTATATCTAAGGGTCATAAGAATTATAATTTGATGCTAAATCTGCAATTGGGGATAAGGCACGTTGTTGGGAAAGAAGCTTCTATTTTCAGAGAGATTAAACCGAGTGATTTCGATCCAAATGTGAAGTTCTGGATCAGGTTTCCACCTGAAGGATCTAAGATCACGCCACCACATCAATCCGGGGAGTTTCGGTGGAAGGATTACTGCCCTGTGGTTTTTAGACAGTTGAGGAAGCAATTTCAGGTGGATCCTGCTGATTATATGTTATCTATATGTGGAGATATGACCCTCAGGGAGCTTTCCTCTCCAGGGAAAAGTGGAAGCTTCTTCTACTTGACCCAAGATGATAAATTTATAATCAAAACAGTGAAGTTATCTGAAGTCAAGGTGCTTCTTCGGATGCTTCCAAGTTATTACAAACATGTATCTCAGTATGAAAATTCACTTGTGACAAAATTCTTTGGTGTACACTGTGTCAAACCAATTGGAGGCCCAAAGATTCGGTTCATTGTTATGGGCAATCTTTTCTTCTCAGAATTTCCAATCCACAGACGATTTGACTTGAAAGGATCTTCATATGGCCGTACAACAGCTAAGACCGGGGAGGAGGTTGATGAAACTACCACTCTCAAGGATCTAGATCTTAATTTTGCATTTCGTCTACAAAGAAGTTGGTTCAAGGATTTCATCAAGCAAATTGAGCGTGACTGTGAGTTTTTGGAAGCCGAGGGAATTATGGATTACAGTCTTTTGGTTGGTCTTCATTTTCGTGATGATAATACATGGGACAAAATGGGATTGTCACCATTTCTTTTGCGCACTGGCAGCCAGGATTCTTATCAGGGTGAAAAGTTCAGGCGTGGACATCGCTTTCTTGAAGCAGAGCTACAGGATAGGGATCGGGTTAAATCAGGCCGAAAATCATTGATCAGGTTAGGAGCCAATATGCCTGCTAGAGCGGAGCGCATGGCCCGAAGGAGTGGTTTTACCCCTTATCCCAGTGGGGAGACTTCTGATGTCATACTATACTGCGGTATCATTGACATTTTGCAAGATTATGATATTAGCAAGAAGCTGGAGCATGCATACAAGTCATGGCAGGTTGACCCGTCTTCAATCTCAGCTGTTAATCCTAAATCTTACTCGAGGAGGTTTCGTGATTTTGTGGGAAGAATATTCATTGAAGACAGGTAG 2160 0.4269 MREALVPDYSTPTDSNKDTHNNQNPSQPVHLPGRTRSQTGIRKVTPTTEPDVTVEEVLPNGDYYMGSFLFNAPHGSGKYLWTDGCMYEGEWKRGKASGKGKFSWPSGATYEGEFKLGRIEGFGMFIGSDGDTYRGCWSFDKKNGYGQKRYVNGDLYEGNWKKNVQDGEGRYVWKNGNEYFGEWRNGVICGNGVLIWSNGNRYEGKFENGVAKGQGIFTRSDGSCYVGIWNKDLKIQNLNGNDKFLDLNGSDKCLGVAEKNVPRIYIWESESETGDITCDVINNVPLLYKEAAIETVSDHKEINQFQRNPICFSNEVKRPGGIISKGHKNYNLMLNLQLGIRHVVGKEASIFREIKPSDFDPNVKFWIRFPPEGSKITPPHQSGEFRWKDYCPVVFRQLRKQFQVDPADYMLSICGDMTLRELSSPGKSGSFFYLTQDDKFIIKTVKLSEVKVLLRMLPSYYKHVSQYENSLVTKFFGVHCVKPIGGPKIRFIVMGNLFFSEFPIHRRFDLKGSSYGRTTAKTGEEVDETTTLKDLDLNFAFRLQRSWFKDFIKQIERDCEFLEAEGIMDYSLLVGLHFRDDNTWDKMGLSPFLLRTGSQDSYQGEKFRRGHRFLEAELQDRDRVKSGRKSLIRLGANMPARAERMARRSGFTPYPSGETSDVILYCGIIDILQDYDISKKLEHAYKSWQVDPSSISAVNPKSYSRRFRDFVGRIFIEDR 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0397 719 MobiDBLite consensus disorder prediction 1 40 - -
Lal4g0397 719 Pfam MORN repeat 133 154 IPR003409 -
Lal4g0397 719 Pfam MORN repeat 87 108 IPR003409 -
Lal4g0397 719 Pfam MORN repeat 64 86 IPR003409 -
Lal4g0397 719 Pfam MORN repeat 179 201 IPR003409 -
Lal4g0397 719 Pfam MORN repeat 202 223 IPR003409 -
Lal4g0397 719 Pfam MORN repeat 110 132 IPR003409 -
Lal4g0397 719 Pfam MORN repeat 156 177 IPR003409 -
Lal4g0397 719 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 315 496 IPR027484 -
Lal4g0397 719 SMART PIPK_2 355 716 IPR002498 GO:0016307|GO:0046488
Lal4g0397 719 Gene3D - 497 715 - -
Lal4g0397 719 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 59 163 - -
Lal4g0397 719 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 324 715 IPR002498 GO:0016307|GO:0046488
Lal4g0397 719 CDD PIPKc_AtPIP5K_like 329 714 - -
Lal4g0397 719 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 39 718 IPR023610 -
Lal4g0397 719 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 414 713 IPR002498 GO:0016307|GO:0046488
Lal4g0397 719 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 151 235 - -
Lal4g0397 719 MobiDBLite consensus disorder prediction 9 40 - -
Lal4g0397 719 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 39 718 - -
Lal4g0397 719 Gene3D - 186 261 - -
Lal4g0397 719 Gene3D - 139 185 - -
Lal4g0397 719 Gene3D - 94 138 - -
Lal4g0397 719 Gene3D - 56 93 - -
Lal4g0397 719 SUPERFAMILY SAICAR synthase-like 325 715 - -
Lal4g0397 719 SMART morn 62 83 IPR003409 -
Lal4g0397 719 SMART morn 154 175 IPR003409 -
Lal4g0397 719 SMART morn 200 221 IPR003409 -
Lal4g0397 719 SMART morn 131 152 IPR003409 -
Lal4g0397 719 SMART morn 177 198 IPR003409 -
Lal4g0397 719 SMART morn 108 129 IPR003409 -
Lal4g0397 719 SMART morn 85 106 IPR003409 -
Lal4g0397 719 PIRSF PIP5K_plant 236 719 IPR017163 GO:0005524|GO:0016308
Lal4g0397 719 PIRSF PIP5K_plant 8 253 IPR017163 GO:0005524|GO:0016308
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0397 Lal-Chr4 2737146 2741354 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0397 34 718 Acyl Lipid Metabolism Gene Families AT1G77740 68.227 0.0 975
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0397 K00889 - gmx:100813118 1108.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0397 4 2737146 2741354 Lal4g0397 4 2737146 2741354 ECH
Lal17g0451 17 3082057 3086263 Lal4g0397 4 2737146 2741354 LSH