Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0451 ATGCGGCAAGCACTTGTACCTGATTACTCAACAGATTCAGACAAAGACACTGACCACCAAAAACCATCTTCACCGGTTCATTTAACCGGTCGAACCCGATCCCAAACCGGAACTCGAAAGGTCACTCCCACAACTACTGAACCGGACGTTATAACCGTTGAGAAGCTTTTACCCAACGGTGACTACTACATGGGTTCTTTCTCCGGTAATGCACCAAACGGTTCCGGTAAGTATCTTTGGACCGATGGGTGCATGTACGAAGGAGAATGGAGGCGTGGAAAGGCTTCAGGTAAAGGTAAATTTTCATGGCCATCTGGTGCAACCTATGAAGGGGAATTCAAATCGGGTCGAATGGAAGGGTTTGGAACTTTTACGGGTTCAGATGGTGATACATATCGTGGGTCTTGGAGCTCCGATAAGAAAAATGGGTATGGTCAGAAGCGTTATGCAAATGGGGATTTCTATGAAGGAAGTTGGAAGAAGAATGTGCAAGATGGTGAGGGTAGGTATGTGTGGAAGAACGGGAATGAGTATATTGGTGAATGGAGGAATGGGATTATTTGTGGGAAAGGGGTCCTTATTTGGGTCAATGGGAACCGTTACGAAGGGCAATGGGAAAATGGGGTTGCTAAAGGACAAGGGATTTTTACTTGGGTTGATGGGAATTGCCATGTTGGGATTTGGAATAAGGTTAATGGAACTTTTTACCATGGGAATGGGAATGAGAAGTGTTTGGATTTGAAGGGGAATGATTTTAGTATAACTGTGAGGAAGAGTAGTTCAATTGATGGTGCTGCAGAGATGAATTTTCCGCGGATTTGTATTTGGGAATCGGAGGGTGAGGCCGGTGATATAACTTGTGATATTATTGATAATGTGTCTTTGTATAAAGAAGCTGCCTTTGGAATGTGTTCGGATCGAAAAGAGATTAAACAGTTTCAGAAGAAACCTATATGTTTCTCAAATGAGGTGAAAAGGCCTGGGGAGACTATTTCCAAGGGGCATAAGAATTATGATCTCATGCTAAATCTGCAACTGGGGATAAGGCATTCTGTTGGGAAGGAAGCTTCCATACCAAGAGAGATTAAACCCAGTGATTTTGATCCGAATGAGAAGTTCTGGACCAGGTTTCCTCCTGATGGATCCAAGATCACACCGCCGCATCAATCAACCGATTTTCGCTGGAAGGACTACTGCCCTATGGTTTTTAGACAATTGAGGAAGCTATTTCAGGTGGATCCTGCTGATTACATGTTAGCTATATGTGGGGATATGGCCCTTAGGGAGCTTTCCTCTCCAGGTAAAAGTGGGAGCTTCTTCTACTTGACCCAAGATGACAGATTTATGATCAAGACAGTGAAGAAATCCGAAGTCAAGGTACTTCTTCGGATGCTTCCAAGTTATTACCAACATGTCTCCCGGTATGAGAATTCACTTGTGACAAAATTCTATGGTTTACACTGTGTCAAACCAATTGGAGGCCAAAAGACTCGGTTCATTGTGATGGGCAATCTATTCTGCTCAGAATATCCAATCCATAGACGATTTGACTTGAAAGGATCTTCATATGGCCGTACAACAGATAAGACAGAGGAGGAGATTGATGAAACTACCACCCTCAAGGACCTGGATCTCAATTTTTCATTTCGTCTACAACGAAATTGGTTCAAGGATCTCATCAAACAAATCGAGCAGGACTGTGAGTTCTTGGAAGCTGAGGGAATTATGGATTACAGTCTTTTGGTTGGTCTTCATTTTCGTGATGATAATACATGGGACAAAATGGGATTGTCACCATTTCTTTTGCGCACTGGTATTGCTCCATATATCACTTTCAGTCTATATAGCAGACAAGGTTCATTTAATGGTAGAATTGCTAAAGTTATTGTGTTGTGGCCACTTTTAGGCAAGCAGGATTCTTATCAGAGTGAAAAGTTCATGCGTGGATATCGCTTTCTTGAAGCAGAACTACAGGATAGGGATCGAGTTAAATCGGGCCGGAAATCATTGATCAGGTTAGGAGCCAATATGCCTGCAAGAGCAGAGCGCATGGCCCGTAGGAGTGATTTTGATCAATACAACACTGTTGGAATCAGCCATTTTACCCCTTATCCCAGCGGGGAGACTTATGATGTTGTTCTATACTTCGGGATCATTGACATTTTGCAAGATTATGATATCAGCAAGAAGCTGGAGCATGCATACAAGTCGTGGCAGGTTAACCCTTCTTCAATCTCAGCTGTTAATCCTAAGTCCTACTCCAAGAGGTTCCGTGATTTCGTGGGAAGAATATTCCTTGAAGACAGGTAG 2310 0.4307 MRQALVPDYSTDSDKDTDHQKPSSPVHLTGRTRSQTGTRKVTPTTTEPDVITVEKLLPNGDYYMGSFSGNAPNGSGKYLWTDGCMYEGEWRRGKASGKGKFSWPSGATYEGEFKSGRMEGFGTFTGSDGDTYRGSWSSDKKNGYGQKRYANGDFYEGSWKKNVQDGEGRYVWKNGNEYIGEWRNGIICGKGVLIWVNGNRYEGQWENGVAKGQGIFTWVDGNCHVGIWNKVNGTFYHGNGNEKCLDLKGNDFSITVRKSSSIDGAAEMNFPRICIWESEGEAGDITCDIIDNVSLYKEAAFGMCSDRKEIKQFQKKPICFSNEVKRPGETISKGHKNYDLMLNLQLGIRHSVGKEASIPREIKPSDFDPNEKFWTRFPPDGSKITPPHQSTDFRWKDYCPMVFRQLRKLFQVDPADYMLAICGDMALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVLLRMLPSYYQHVSRYENSLVTKFYGLHCVKPIGGQKTRFIVMGNLFCSEYPIHRRFDLKGSSYGRTTDKTEEEIDETTTLKDLDLNFSFRLQRNWFKDLIKQIEQDCEFLEAEGIMDYSLLVGLHFRDDNTWDKMGLSPFLLRTGIAPYITFSLYSRQGSFNGRIAKVIVLWPLLGKQDSYQSEKFMRGYRFLEAELQDRDRVKSGRKSLIRLGANMPARAERMARRSDFDQYNTVGISHFTPYPSGETYDVVLYFGIIDILQDYDISKKLEHAYKSWQVNPSSISAVNPKSYSKRFRDFVGRIFLEDR 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0451 769 SMART morn 176 197 IPR003409 -
Lal17g0451 769 SMART morn 84 105 IPR003409 -
Lal17g0451 769 SMART morn 153 174 IPR003409 -
Lal17g0451 769 SMART morn 130 151 IPR003409 -
Lal17g0451 769 SMART morn 107 128 IPR003409 -
Lal17g0451 769 SMART morn 199 220 IPR003409 -
Lal17g0451 769 SMART morn 61 82 IPR003409 -
Lal17g0451 769 MobiDBLite consensus disorder prediction 1 47 - -
Lal17g0451 769 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 2 632 768 - -
Lal17g0451 769 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 2 28 607 - -
Lal17g0451 769 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 323 504 IPR027484 -
Lal17g0451 769 Pfam MORN repeat 109 131 IPR003409 -
Lal17g0451 769 Pfam MORN repeat 86 107 IPR003409 -
Lal17g0451 769 Pfam MORN repeat 132 153 IPR003409 -
Lal17g0451 769 Pfam MORN repeat 201 222 IPR003409 -
Lal17g0451 769 Pfam MORN repeat 63 85 IPR003409 -
Lal17g0451 769 Pfam MORN repeat 178 200 IPR003409 -
Lal17g0451 769 Pfam MORN repeat 155 176 IPR003409 -
Lal17g0451 769 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 336 765 IPR002498 GO:0016307|GO:0046488
Lal17g0451 769 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 58 162 - -
Lal17g0451 769 CDD PIPKc_AtPIP5K_like 337 764 - -
Lal17g0451 769 SMART PIPK_2 363 766 IPR002498 GO:0016307|GO:0046488
Lal17g0451 769 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 128 241 - -
Lal17g0451 769 PIRSF PIP5K_plant 235 769 IPR017163 GO:0005524|GO:0016308
Lal17g0451 769 PIRSF PIP5K_plant 6 246 IPR017163 GO:0005524|GO:0016308
Lal17g0451 769 MobiDBLite consensus disorder prediction 23 47 - -
Lal17g0451 769 SUPERFAMILY SAICAR synthase-like 333 765 - -
Lal17g0451 769 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 422 763 IPR002498 GO:0016307|GO:0046488
Lal17g0451 769 Gene3D - 505 600 - -
Lal17g0451 769 Gene3D - 673 765 - -
Lal17g0451 769 Gene3D - 138 190 - -
Lal17g0451 769 Gene3D - 52 92 - -
Lal17g0451 769 Gene3D - 93 137 - -
Lal17g0451 769 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 28 607 IPR023610 -
Lal17g0451 769 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 632 768 IPR023610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0451 Lal-Chr17 3082057 3086263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0451 31 768 Acyl Lipid Metabolism Gene Families AT1G77740 69.973 0.0 1068
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0451 K00889 - gmx:100813118 1164.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0451 17 3082057 3086263 Lal17g0451 17 3082057 3086263 ECH
Lal17g0451 17 3082057 3086263 Lal4g0397 4 2737146 2741354 LSH