Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0378 ATGGCTACTGAAGCATGTTGCCAGGCTATTGGAATTTTGCAGTCTCATTCTTTTCTAAACAATTTTAATCATCACCAGAAGCTTCAAATCAATTTAGTAAAATTTGTGACAAGGGATTGTTTAAGTAGTAATGGCTTGTCAAGCCGGGGAAGTAACTACTCCGGCCAGAGGAACTATGGTATAGTTCGATCTTCAGCTTCCCAAACATCAGTGGTTGATCCAGTGTCATCCCCTTCAAGAAGCAACACTGGTGAAACTAACAAGAAATCAAGTGAAGCAGCTTTGATCCTTATTCGGCATGGTGAGTCTTTATGGAATGAGAAGAACTTATTCACAGGCTGTGTTGATGTCCCACTTAGCAAGAAGGGCATTGATGAGGCAATTGAAGCTGGCAAAAGAATCAGCAGCATTCCTGTTGATGTCATATTTACATCTGCTTTGATCCGTGCACAAATGACAGCCATGCTTGCCATGACCCAGCATCGTCGTAAAAAGGTGCCTATTGTTATGCATAATCAGAGTGAACAAGCAAGGACATGGAGTCAAGTTTTTAGTGAAGATACAAAAAAGCAGTCCATTCCAGTCGTAGCATCTTGGCAACTAAATGAAAGAATGTATGGGGAACTACAGGGTCTCAATAAGCAAGAAACAGCAGACAGATATGGGAAAGAACAAGTTCATGAGTGGCGCCGAAGTTACGACATACCTCCTCCAAATGGTGAAAGTTTGGAAATGTGTGCTGAAAGAGCAGTTGCCTATTTCAGAGACCAAATTGAACCTCAACTTTTATCTGGAAAGAATGTTATGATTGCTGCACATGGGAATTCACTGAGATCCATCATCATGTATCTCGATAAATTGACATCCCAAGAGGTCATTAGTTTAGAACTGTCAACTGGGATTCCCATGCTTTACATTTTCAAGGAGGGAAGATTCATTAGGAGGGGAAGCCCCATTGGACCGTCTGAAGCTGGAGTTTATGCTTATACTAGGGGCATACATTCACCATTAATTAGCAACATCACAGTTGAATCACAAATAAAAGAGGGACATGTTCTCAGTGTTATTGTTAGGCTAGATTGTTTTGGATGTCTAGTACTGTTTCTCCCATTCTTAGATATATTTATCTCATATTGGTAA 1140 0.4053 MATEACCQAIGILQSHSFLNNFNHHQKLQINLVKFVTRDCLSSNGLSSRGSNYSGQRNYGIVRSSASQTSVVDPVSSPSRSNTGETNKKSSEAALILIRHGESLWNEKNLFTGCVDVPLSKKGIDEAIEAGKRISSIPVDVIFTSALIRAQMTAMLAMTQHRRKKVPIVMHNQSEQARTWSQVFSEDTKKQSIPVVASWQLNERMYGELQGLNKQETADRYGKEQVHEWRRSYDIPPPNGESLEMCAERAVAYFRDQIEPQLLSGKNVMIAAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLYIFKEGRFIRRGSPIGPSEAGVYAYTRGIHSPLISNITVESQIKEGHVLSVIVRLDCFGCLVLFLPFLDIFISYW 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0378 379 MobiDBLite consensus disorder prediction 65 88 - -
Lal4g0378 379 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 97 106 IPR001345 GO:0003824
Lal4g0378 379 Hamap 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 92 319 IPR005952 GO:0004619|GO:0006096|GO:0016868
Lal4g0378 379 SMART PGAM_5 94 280 IPR013078 -
Lal4g0378 379 CDD HP_PGM_like 95 314 IPR013078 -
Lal4g0378 379 Gene3D - 84 317 IPR029033 -
Lal4g0378 379 PANTHER PHOSPHOGLYCERATE MUTASE 1, HISTIDINE PHOSPHATASE SUPERFAMILY-RELATED 1 332 - -
Lal4g0378 379 Pfam Histidine phosphatase superfamily (branch 1) 190 298 IPR013078 -
Lal4g0378 379 Pfam Histidine phosphatase superfamily (branch 1) 95 162 IPR013078 -
Lal4g0378 379 SUPERFAMILY Phosphoglycerate mutase-like 95 311 IPR029033 -
Lal4g0378 379 PANTHER PHOSPHOGLYCERATE MUTASE 1 332 IPR005952 GO:0004619|GO:0006096|GO:0016868
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0378 Lal-Chr4 2577801 2581931 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0378 K01834 - gmx:100802621 572.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0378 4 2577801 2581931 Lal4g0378 4 2577801 2581931 ECH
Lal21g0493 21 3504615 3506816 Lal4g0378 4 2577801 2581931 LSH