Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0493 ATGCAGAACTTCTACGCTATATTAATTAATAATGGGTTATCAAGCAAAGGAAGTTACCACTACGGCCAAAGGAAGTGTGCTATAATTCGATCTTCAGTGGTTGATCCAGTGTCAAGAAGCAACACTGGTGAAACTAACAAGAAATCAAGTGAAGCAGCTTTGATCCTTGTTCGGCATGGCGAGTCTTTATGGAATGAAAAAAACTTATTCACAGGTTGTGTAGATGTTCCACTAAGCAAGAATGGCATTGATGAAGCAATTGAAGCTGGCAAAAGAATTAGCAGCATTCCTATTGATTTCATATTTACATCTGCTTTGATCCGAGCACAAATGACCGCCATGCTTGCAATGACCCAACATCGTAGTAAAAAGGTGCCTATAGTTATGCATAATGAGAGTGAACAAGCAAGGTCATGGAGTCAAACCCAGCCTATAGTTACTGTTAGATCAGCATCAGAATCTGCATTTAACTTGATTGAATCCAAAGAAGGAAGGTTTTGTTGTGGCACAGATGATAGAGTATTTGCCAGTGTCCAGAAAGAGGTTGCAAGAATAGAAAACAGGACACAGCCCACCTATGCATTATGGGAAAAGAATCATGTCTAG 606 0.3977 MQNFYAILINNGLSSKGSYHYGQRKCAIIRSSVVDPVSRSNTGETNKKSSEAALILVRHGESLWNEKNLFTGCVDVPLSKNGIDEAIEAGKRISSIPIDFIFTSALIRAQMTAMLAMTQHRSKKVPIVMHNESEQARSWSQTQPIVTVRSASESAFNLIESKEGRFCCGTDDRVFASVQKEVARIENRTQPTYALWEKNHV 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0493 201 PANTHER PHOSPHOGLYCERATE MUTASE 23 142 IPR005952 GO:0004619|GO:0006096|GO:0016868
Lal21g0493 201 CDD HP_PGM_like 54 125 IPR013078 -
Lal21g0493 201 SUPERFAMILY Phosphoglycerate mutase-like 54 130 IPR029033 -
Lal21g0493 201 Pfam Histidine phosphatase superfamily (branch 1) 54 125 IPR013078 -
Lal21g0493 201 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 56 65 IPR001345 GO:0003824
Lal21g0493 201 SMART PGAM_5 53 155 IPR013078 -
Lal21g0493 201 PANTHER PHOSPHOGLYCERATE MUTASE 1, HISTIDINE PHOSPHATASE SUPERFAMILY-RELATED 23 142 - -
Lal21g0493 201 Gene3D - 36 181 IPR029033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0493 Lal-Chr21 3504615 3506816 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0493 K01834 - gmx:100802621 208.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0493 21 3504615 3506816 Lal21g0493 21 3504615 3506816 ECH
Lal21g0493 21 3504615 3506816 Lal4g0378 4 2577801 2581931 LSH