Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0350 ATGGCCCAACGAAAGAGGGTAAGAAATTTCGCTAACAAACTCAAAGACAAAGCCTCACTCATCGCAGCAACATTTTCCTTCAAGCACCACTTGTCTTCCATCCATGTCCACGTCATCCGCGCCACCACCCACGCCCTCGCCGCCACTCCCTCAGAGTCAACTATCGCCGCTGTCCTCGGCCTTGGTCAACATCAGAAATTCCCACGTGCATGCATCGACGCGCTCATGGATCGTCTTCACCACACGCGCAGCGCCACTGTCGCCATGAAATGCCTCTTCACCCTCCACAACGTCGTTGTTAAAGGACCCATTACGCTAAAGGATCAATTTTCTCATTACCCTTCTTACGGTGGTCATAACTTTCTTAACCTTTCAACGTTTCGTGATGACTCGGACGTTGAATCGGTTGAACTCAGTTCTTGGGTTCGTTGGTATGCCGTTGTTATAGAACAATGTTTAACGGTTTCAAGAATCATGGGTCATTATCTACACCTTTCTTTGAACGAACAAGATCATACCCAAGAAAGAAATTCTTCATTTTTCAGATTATCGAATGCAGATTTGTTATATAAAATAGAAGGTCTTATTCTATTTGTTGAACAAGTGAGTCGTGTCCCTGAATCGTTGCATCTTCAGAGAAAGGATTTGATTTATGAAGTAGTGAAATTAGTGCGTGAAGATTATAGAAGCGCTCAGCGTGAGATTTTATGGCGACTTGAGGAACTTGAGAAGAGAATGAAGGATTTAGATGTTGGAGAATTGAACGAGTTGGTGGGATATTTGGAAAGATTGGAAGAGAGTAAAGAAAAGTTGGTGATTTTGTTTGTGAATAAGATTAAGTATAATGGGTTTTGGGATTTGGTTAAGGAAGTTAAGAAGAAAGGGTTGGAGATGAAGAAGGAGATAGAGGGGAAGTGGCTCACGGTGGTGACGACGAAAAACACCGAGTTGACTCGGTCCACTAATCCGTTTCTTGAGCCGGGGCAAATCGTTCTGGTCCCACCGTTAAGAATCTGCACCTTCGAGATGGAAGTAGGTTGCTTCATGATTAAAGTGGAAACATAG 1065 0.4376 MAQRKRVRNFANKLKDKASLIAATFSFKHHLSSIHVHVIRATTHALAATPSESTIAAVLGLGQHQKFPRACIDALMDRLHHTRSATVAMKCLFTLHNVVVKGPITLKDQFSHYPSYGGHNFLNLSTFRDDSDVESVELSSWVRWYAVVIEQCLTVSRIMGHYLHLSLNEQDHTQERNSSFFRLSNADLLYKIEGLILFVEQVSRVPESLHLQRKDLIYEVVKLVREDYRSAQREILWRLEELEKRMKDLDVGELNELVGYLERLEESKEKLVILFVNKIKYNGFWDLVKEVKKKGLEMKKEIEGKWLTVVTTKNTELTRSTNPFLEPGQIVLVPPLRICTFEMEVGCFMIKVET 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0350 354 CDD ANTH_N_AP180_plant 34 156 - -
Lal4g0350 354 Gene3D - 5 162 IPR008942 -
Lal4g0350 354 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 335 IPR045192 GO:0048268|GO:0072583
Lal4g0350 354 Pfam ANTH domain 35 204 IPR011417 GO:0005543
Lal4g0350 354 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 335 - -
Lal4g0350 354 SUPERFAMILY ENTH/VHS domain 32 159 IPR008942 -
Lal4g0350 354 ProSiteProfiles ENTH domain profile. 26 163 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0350 Lal-Chr4 2382246 2389382 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0350 - - gmx:100788852 429.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0350 4 2382246 2389382 Lal4g0350 4 2382246 2389382 ECH
Lal17g0394 17 2649632 2650672 Lal4g0350 4 2382246 2389382 LSH