Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0394 ATGGCCCAACAAAAAAGGCTAAGAAATCTCGCTCACAAACTCAAAGACAAAGCGTCAGTTATCTCAGCAGCATTATCCATCAAGCGCCACGTGTCCTCCGTCCATGTCCACGTCATTCGCGCCACCACCCACGCCCTCGCCGCCCCTCCTTCAGAGTCAAGAATCGCTGCTCTCCTCAACGTTGGTCACGGCCCGCACCCGCAGCTCCCACGCGCATGCATCGACGCGCTCATGGACCGTCTTCACCACACGCGCAGCGCCACCGTTGCCATGAAATGTCTATTCACCCTCCACAACGTCGTCGTAAAAGGCACCTTCACGTTAAAGGATCAACTCTCTTATTACCCTTCCTACGGTGGCCATAATTTTCTTAACCTGTCCACTTTTCGTGATGACTCGGACGTTGATTCGGTTGAACTCAGTTATTGGGTTCGTTGGTACGCTGTTGTTCTTGAACAGTGCGTAACGATTTCGAGAATCTTGGGTTATTATCTTCACTCTTCTTCGAATGATAGCGTTAAGGAATATCGTACCCAAGAGAGAAAGTCTTTGGTTTTTGGCTTATCGAACGCTGATTTGTTATATAAAATGGAAGGTCTTGTGCAATTTGTTGAACAAGTGAGCTATGTCCCACAGTCATTGCACCTTCAAAAGAATGAGTTAGTTTATGAAGTGGTGCGATTGGTGGGTGAAGATTACAGAAGCGTTCAACGTGAGATTTCGTTGCAGGTTGAGGAACTTGGGAATAGAACGGAGGATTTGGATGTTGGGGCATTAAACGAGTTGTTGGGGTATTTGCGAAGATTGGAGGAAAGTAAAGAAAAATTGGTTCTTTTGTTTGTGAATAGAATTAAGAATAATGGGTTTTGGGATTTGGTTAAGAAGGTTAAGATGAAAGTGTTGGCGATGAAGGAGGAGATAGAGGGGAAGTGGCTCACGGTTGTTACAGCCACAGCCACCGAGTTGACTCGGTCCACGAACCCGATTCTTGAGCCGGGGCAAATCGTTCCGGTCCCACCGTCAACTTTTGCAACGGTATAA 1041 0.4717 MAQQKRLRNLAHKLKDKASVISAALSIKRHVSSVHVHVIRATTHALAAPPSESRIAALLNVGHGPHPQLPRACIDALMDRLHHTRSATVAMKCLFTLHNVVVKGTFTLKDQLSYYPSYGGHNFLNLSTFRDDSDVDSVELSYWVRWYAVVLEQCVTISRILGYYLHSSSNDSVKEYRTQERKSLVFGLSNADLLYKMEGLVQFVEQVSYVPQSLHLQKNELVYEVVRLVGEDYRSVQREISLQVEELGNRTEDLDVGALNELLGYLRRLEESKEKLVLLFVNRIKNNGFWDLVKKVKMKVLAMKEEIEGKWLTVVTATATELTRSTNPILEPGQIVPVPPSTFATV 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0394 346 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 341 - -
Lal17g0394 346 ProSiteProfiles ENTH domain profile. 26 165 IPR013809 -
Lal17g0394 346 Pfam ANTH domain 35 278 IPR011417 GO:0005543
Lal17g0394 346 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 341 IPR045192 GO:0048268|GO:0072583
Lal17g0394 346 SUPERFAMILY ENTH/VHS domain 33 162 IPR008942 -
Lal17g0394 346 Gene3D - 5 163 IPR008942 -
Lal17g0394 346 CDD ANTH_N_AP180_plant 35 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0394 Lal-Chr17 2649632 2650672 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0394 - - gmx:100788852 455.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0394 17 2649632 2650672 Lal17g0394 17 2649632 2650672 ECH
Lal17g0394 17 2649632 2650672 Lal4g0350 4 2382246 2389382 LSH