LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal4g0339	ATGGCTTCAATTTCAGTCAAACTTTATTCATCTTCTCCAACTCTCAAATTCAAACACCATTCCCCAACGTTCTTCCGAAAACAATTCATCTCCTTCCCCACTCGTCCTAACCTCGCCGCTGAACGTACCCTTACCCTCTCCGTAGCCCGTGAAGTCCCGGCGGAGCTGTCAACCGTTAACGACGGCGCCATCACCAATGAAAACAAAAAAAAGTCAGGGTTGGAGAAAGACCCAATTGCTCTATGGCAAAGATACGTGGAGTGGTTGTACCAGAACAAGGAACTTGGGGTATACATCGATGTGAGTCGAGTTGGGTTCAGTGATGAGTTCGTGGAGAAGATGGAGAAAAGTTTAGAGAAAGCGTTTCGTGAAATGGAGGAGCTTGAGAAAGGTGCGATCGCTAACCCAGATGAGGGTAGAATGGTTGGACATTATTGGTTAAGGGACCCTAATCGTGCACCTACTCCTTTTCTCAACACTCAGATTCAGAACACACTCCAAAATATTTCCAACTTTGCCAATGATATCATCACTGCTAAGATTAAGCCTCCATCATCTCCTGAGGGCCGGTTTACTCAAATACTGTGTATCGGAATTGGAGGTTCGGCTCTTGGACCACAATTTGTTGCAGAGGCATTGGCTCCAGATAATCCTCCACTCAAGATAAGATTTGTTGACAACACAGATCCTGCTGGAATTGATCATCAGATTGCGCAACTTGGCCCTGAACTTGCTTCAACACTTGTAATAGTGACTTCAAAGAGTGGAGGTACCCCTGAGACTAGAAATGGCTTATTAGAAGTACAGAAGGCCTTTCGTGAAGCAGGCTTGGATTTTTCAAAACAGGGTGTTGCTATAACACAAGAAAACTCTTTGTTGGATAACACTGCTAGAATTGAGGGCTGGTTAGCTACGTTCCCCATGTTTGATTGGGTGGGAGGTAGAACATCAGAGATGTCTGCAGTTGGACTACTACCAGCAGCGCTTCAGGGCATTGATATTAAAGAGATGCTTACTGGTGCAGCATTGATGGATGAGGCAAATAGAAGTAATGTGTTAAAGAGTAATCCTGCAGCTCTTCTGGCTTTATCCTGGTACTGGGCCACTGATGGTGTAGGATCCAAGGATATGGTTATCCTTCCATACAAAGACAGCTTGTTATTATTTAGTAGATACTTGCAGCAGCTTGTGATGGAATCACTTGGCAAGGAGTTTGACTTGGATGGTAATCGGGTTAATCAAGGAATCAGTGTGTATGGAAATAAAGGAAGCACGGATCAGCATGCCTATATTCAACAATTGAGGGAAGGAGTGCACAATTTCTTTGCAACATTCATTGAGGTGCTGCGTGATAGACCCCCTGGTCATGATTGGGAACTCGAACCTGGTGTCACATGTGGTGACTACCTGTTTGGTATGCTACAGGGAACAAGGTCAGCCCTGTACGCTAATAACCGAGAGTCCATCACAGTCACTGTAGAAGAAGTGACACCAAGATCAGTTGGTGCTCTTATTGCACTCTATGAGCGAGCAGTAGGGATATATGCATTCCTTGTCAACATAAATGCTTACCATCAACCTGGTGTGGAAGCTGGTAAAAAAGCAGCAGGTGAAGTATTAGCACTTCAGAAGCGAGTGTTGGCAGTGTTGAATGAGGCGAGCTGCAAACAACCTGTTGAGCCATTGACGCTCGAAGAAGTAGCCGAGCGCTGCCATGCTTCAGAAGATATTGAAATGATTTACAAGATTATAGCTCATATGGCTGCCAATGATAGAGCGCTAATTGCCGAAGGAAGCTGCGGTTCACCACGAAGTATCAAGGTTTTTCTTGGAGAGTGTAATGTTGATGACTTATATGCATGA	1863	0.4482	MASISVKLYSSSPTLKFKHHSPTFFRKQFISFPTRPNLAAERTLTLSVAREVPAELSTVNDGAITNENKKKSGLEKDPIALWQRYVEWLYQNKELGVYIDVSRVGFSDEFVEKMEKSLEKAFREMEELEKGAIANPDEGRMVGHYWLRDPNRAPTPFLNTQIQNTLQNISNFANDIITAKIKPPSSPEGRFTQILCIGIGGSALGPQFVAEALAPDNPPLKIRFVDNTDPAGIDHQIAQLGPELASTLVIVTSKSGGTPETRNGLLEVQKAFREAGLDFSKQGVAITQENSLLDNTARIEGWLATFPMFDWVGGRTSEMSAVGLLPAALQGIDIKEMLTGAALMDEANRSNVLKSNPAALLALSWYWATDGVGSKDMVILPYKDSLLLFSRYLQQLVMESLGKEFDLDGNRVNQGISVYGNKGSTDQHAYIQQLREGVHNFFATFIEVLRDRPPGHDWELEPGVTCGDYLFGMLQGTRSALYANNRESITVTVEEVTPRSVGALIALYERAVGIYAFLVNINAYHQPGVEAGKKAAGEVLALQKRVLAVLNEASCKQPVEPLTLEEVAERCHASEDIEMIYKIIAHMAANDRALIAEGSCGSPRSIKVFLGECNVDDLYA	620

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal4g0339	620	CDD	SIS_PGI_1	163	329	IPR035476	-
	Lal4g0339	620	SUPERFAMILY	SIS domain	78	543	IPR046348	GO:0097367\|GO:1901135
	Lal4g0339	620	Coils	Coil	111	131	-	-
	Lal4g0339	620	CDD	SIS_PGI_2	375	539	IPR035482	-
	Lal4g0339	620	ProSitePatterns	Phosphoglucose isomerase signature 2.	516	533	IPR018189	GO:0004347\|GO:0006094\|GO:0006096
	Lal4g0339	620	ProSiteProfiles	Glucose-6-phosphate isomerase family profile.	74	549	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Lal4g0339	620	Hamap	Glucose-6-phosphate isomerase [pgi].	94	543	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Lal4g0339	620	Gene3D	-	144	329	-	-
	Lal4g0339	620	Pfam	Phosphoglucose isomerase	102	450	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Lal4g0339	620	Pfam	Phosphoglucose isomerase	481	541	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Lal4g0339	620	Gene3D	-	330	525	-	-
	Lal4g0339	620	PANTHER	GLUCOSE-6-PHOSPHATE ISOMERASE	1	620	-	-
	Lal4g0339	620	PRINTS	Glucose-6-phosphate isomerase signature	194	213	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Lal4g0339	620	PRINTS	Glucose-6-phosphate isomerase signature	306	324	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Lal4g0339	620	PRINTS	Glucose-6-phosphate isomerase signature	382	403	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Lal4g0339	620	PRINTS	Glucose-6-phosphate isomerase signature	484	502	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Lal4g0339	620	PRINTS	Glucose-6-phosphate isomerase signature	502	516	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Lal4g0339	620	PRINTS	Glucose-6-phosphate isomerase signature	516	529	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Lal4g0339	620	PANTHER	GLUCOSE-6-PHOSPHATE ISOMERASE	1	620	IPR001672	GO:0004347\|GO:0006094\|GO:0006096

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal4g0339	Lal-Chr4	2257189	2262088	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal4g0339	K01810		-	gmx:100791285	1038.87

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lal4g0339	4	2257189	2262088	Lal4g0339	4	2257189	2262088	ECH
	Lal17g0380	17	2536756	2541909	Lal4g0339	4	2257189	2262088	LSH