Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0380 ATGACATCAATTTCACTAAAACTCTATTCATCTTCCCCAACTCTGAATTTCCATAACCATTCTCCTTCTCTCTTTCCCTTTTCCATTCGTCCCAAACTCACCACCGACCGCAACCTCTCACTCTCCGTCGCCCGTGATGTCCCGGCGGAGCTCTCACCCATCACCAATGATAACAAAACGAAGCCCCAATTGCAAAAAGACCATATTGCCCTTTGGCATAGATACGTGGATTGGCTTTACCAGCACAAGGACCTTGGTCTATACATCGATGTGAGTCGGGTCGGGTTTACGGATGAGTTCGTTAACCATATGGAGCCCCGTTTCGAGAAAGCGTTTCGTGCAATGGTGGAACTTGAGAAGGGTGCAATCGCTAATCCCGATGAGGGAAGAATGGTGGGACATTATTGGCTTAGGGACCCTAATCGTGCCCCTAATCCATTCCTTAAGACTCAGATTCAGAACACTCTACAAGCTATTTGCAATTTTGCCAATGATATCATCTCTGCTAAGATTAAGCCTCCATCGTCTCCGGAGGGTCGTTTTACTCAAATACTGTCAGTTGGAATTGGAGGTTCAGCTCTCGGACCACAGTTTGTTGCAGAGGCATTGGCTCCTGATAATCCTCCACTCAAGATAAGATTTGTTGACAACACGGATCCTGCTGGAATTGATCATCAGATTGCACAACTTGGCCCTGAGCTAGCTTCCACACTTGTAATAAGTGGAGGTACTCCTGAGACTAGAAATGGTTTATTAGAAGTACAGAAGGCCTTTCGTGAAGCAGGCTTGGATTTTTCGAAACAGGGTGTTGCTATAACACAAGAAAATTCTTTGTTGGATAACACTGCTAGAATTGAGGGCTGGATAGCTAGGTTTCCCATGTTTGATTGGGTGGGAGGTAGAACATCGGAGATGTCTGCAGTTGGCCTGCTTCCTGCTGCTCTTCAGGGCATTGACATTAGAGAAATGCTTATTGGTGCATCATTGATGGATGAGGCAAATCGAAGTACTGTGTTAAAGAATAATCCTGCAGCTCTGCTGGCTTTATGTTGGTATTGGGCCACTGATGGTGTAGGATCCAAGGATATGGTTATCCTTCCATATAAGGACAGCCTGTTATTATTTAGCAGATACTTGCAGCAGCTGGTCATGGAATCTCTTGGCAAGGAGTTTGACTTGGATGGTAATCGGGATTGTGGAACAACGGTTAGCCTTAAATGCTTTGATCCTTCACGAGTTAATGATATATCTGAATCTGACTTTGGGATATCCACAGTAAACTTCTGCTACAGTTATATTCAACAATTGAGGGATGGTGTACACAATTTCTTCGCGACATTCATTGAAGTGCTACGTGATAGACCCCCAGGTCATGATTGGGAACTCGAACCTGGTGTTACATGTGGTGACTACCTGTTTGGCATGCTACAGGGAACAAGGTCAGCTCTGTACGCTAATAACCGAGAGTCCATCACTGTCACTGTAGAAGAAGTGACACCAAGATCTGTTGGTGCTCTTATTGCACTCTATGAACGAGCAGTAGGGATATATGCGTCCCTTGTCAACATCAATGCCTATCATCAACCTGGTGTGGAAGCTGGTAAAAAAGCAGCAGGTGAAGTATTAGCACTTCAGAAGCGAGTGTTGGCAGTGTTAAATGAGGCAAGCTGCAAACAACCTGTTGAGCCATTGAGTCTGGAAGAAGTAGCTGAGCGTTGCCATGCTCCAGAAGATATTGAAATGATTTACAAGATTATTGCTCATATGGCTGCCAATGACAGAGCGATAATTGCTGAAGGAAGCTGCGGTTCACCACGTAGTATCAAGGTTTTTCTTGGAGAGTGTAACATTGATGATTTGTATGTTTGA 1869 0.4468 MTSISLKLYSSSPTLNFHNHSPSLFPFSIRPKLTTDRNLSLSVARDVPAELSPITNDNKTKPQLQKDHIALWHRYVDWLYQHKDLGLYIDVSRVGFTDEFVNHMEPRFEKAFRAMVELEKGAIANPDEGRMVGHYWLRDPNRAPNPFLKTQIQNTLQAICNFANDIISAKIKPPSSPEGRFTQILSVGIGGSALGPQFVAEALAPDNPPLKIRFVDNTDPAGIDHQIAQLGPELASTLVISGGTPETRNGLLEVQKAFREAGLDFSKQGVAITQENSLLDNTARIEGWIARFPMFDWVGGRTSEMSAVGLLPAALQGIDIREMLIGASLMDEANRSTVLKNNPAALLALCWYWATDGVGSKDMVILPYKDSLLLFSRYLQQLVMESLGKEFDLDGNRDCGTTVSLKCFDPSRVNDISESDFGISTVNFCYSYIQQLRDGVHNFFATFIEVLRDRPPGHDWELEPGVTCGDYLFGMLQGTRSALYANNRESITVTVEEVTPRSVGALIALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLALQKRVLAVLNEASCKQPVEPLSLEEVAERCHAPEDIEMIYKIIAHMAANDRAIIAEGSCGSPRSIKVFLGECNIDDLYV 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0380 622 Pfam Phosphoglucose isomerase 483 543 IPR001672 GO:0004347|GO:0006094|GO:0006096
Lal17g0380 622 Pfam Phosphoglucose isomerase 118 397 IPR001672 GO:0004347|GO:0006094|GO:0006096
Lal17g0380 622 ProSiteProfiles Glucose-6-phosphate isomerase family profile. 21 551 IPR001672 GO:0004347|GO:0006094|GO:0006096
Lal17g0380 622 PANTHER GLUCOSE-6-PHOSPHATE ISOMERASE 23 621 - -
Lal17g0380 622 SUPERFAMILY SIS domain 59 544 IPR046348 GO:0097367|GO:1901135
Lal17g0380 622 ProSitePatterns Phosphoglucose isomerase signature 2. 518 535 IPR018189 GO:0004347|GO:0006094|GO:0006096
Lal17g0380 622 Gene3D - 134 315 - -
Lal17g0380 622 Gene3D - 316 527 - -
Lal17g0380 622 PANTHER GLUCOSE-6-PHOSPHATE ISOMERASE 23 621 IPR001672 GO:0004347|GO:0006094|GO:0006096
Lal17g0380 622 CDD SIS_PGI_1 153 315 IPR035476 -
Lal17g0380 622 PRINTS Glucose-6-phosphate isomerase signature 184 203 IPR001672 GO:0004347|GO:0006094|GO:0006096
Lal17g0380 622 PRINTS Glucose-6-phosphate isomerase signature 292 310 IPR001672 GO:0004347|GO:0006094|GO:0006096
Lal17g0380 622 PRINTS Glucose-6-phosphate isomerase signature 368 389 IPR001672 GO:0004347|GO:0006094|GO:0006096
Lal17g0380 622 PRINTS Glucose-6-phosphate isomerase signature 486 504 IPR001672 GO:0004347|GO:0006094|GO:0006096
Lal17g0380 622 PRINTS Glucose-6-phosphate isomerase signature 504 518 IPR001672 GO:0004347|GO:0006094|GO:0006096
Lal17g0380 622 PRINTS Glucose-6-phosphate isomerase signature 518 531 IPR001672 GO:0004347|GO:0006094|GO:0006096
Lal17g0380 622 CDD SIS_PGI_2 361 541 IPR035482 -
Lal17g0380 622 Hamap Glucose-6-phosphate isomerase [pgi]. 89 545 IPR001672 GO:0004347|GO:0006094|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0380 Lal-Chr17 2536756 2541909 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0380 K01810 - gmx:100791285 991.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0380 17 2536756 2541909 Lal17g0380 17 2536756 2541909 ECH
Lal17g0380 17 2536756 2541909 Lal4g0339 4 2257189 2262088 LSH