Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0311 ATGGCCGCTCCTACAAGGGACCAAGCCCTCTCTCTTCTCGCCGCCGCCAACAACCACGGCGACGTCAATGTCAAAACGTCGTCGCTTAAACAAGCCAAAAACATTCTTCTCTCCATTGAACCCTCTCTCGCCGCCGAACTTTTCCCTTACATGCTCGACCTAAAGTCTTCTCCCGAAAGCCTCGTTCGCAAATTGCTCATCCAGGTGATTGAGGAGATTGGATTTAAAGCTGCTGAGCATTATCCTTCACTTTTGTCGGTTCTATTATCATTTTTACGAGATGCTGACGTTGGGGTTGTAAAGCAATCTATTGTTAGTGGCACACATATATTCACTAATGCTTTTGAGGAGTTGACTGTGCAGTTTCAACAATATGGTAAAGTTGAGAGGTGGCTAGAAGAGATTTGGATGTGGATGCTTAAGTTCAAGGATGCTGTTTTTGGGATTGCTCTGGAGCCTGGTCCTGTTGGAATAAAGTTGCTGGCACTGAAATTCTTGGAAACATTTGCCTTACTTTTTACATCTGACATCAGCGATCCTGAGAAATCAACGACAGAAGGGGTGAGGCAAGCTGTTAATATTTCACGGTTGGTGGGTGGTCACCCTGTTCTTGATCCAATGGTGCTCATGTCCGACGCAAATAGGACTATTGGTATTCTATTAAATTTACTGCAGTCTGCTGGCAGTCTCCCTGGTTGCTTGACTATTACTGTTGTAAATTGCTTAGCAGCCATTGCAAGGAAAAGGCCACAACACTACGATACTATTCTTTCTGCATTTTTTGATTTTGATGCAAATTTCCAAACAGTTAAAGGATGTCATAGTCCCAGTATCCAGTACTCCTTAAGAACTGCTTTTTTGGGGTTTCTAAGGTGCATCTATTCCCCAATATTAGAGTCAAGAGAAAGATTGATAAAGAGCCTGCGAGCTATGAATGCTGGGGATGCTGCTGATCAGGTCATTCGGCAAGTTGATAAAATGATTAAAAATGGTGACCGGCTTACCCGTGATGCTCGATTTAGCAAGGATGATCTTCTATCAACTCAGTCAGCTGTTTCTGGGGAATTATCTAGAAAAAGATCTGTTCCTCGTGATAATGAGCAATTGGCCAATGGTCATGAGGTCATATCTAAGCGGATTCGTTCCAGTTCTGACCCTCATTTTACTTTACCATCTCCAATAAATGATTCTGTGCAAGATCTTAATTCTGTTAATGGAGTTTCACCTAATGTCCCTGTGCTGGATAGTGAATTAACTGCTGTTGAGCAAATGATTGCTCTGATTGGTGCTTTGCTTGCTGAAGGAGAAAGAGGTGCCGAATCTCTTGAAATCCTTATTTCAAAGATTCATCCTGATCTGTTGGCTGATATTGTTATAACAAATATGAAACACTTGCCTGCCACACCCCCACCACTAGCAAGGCTTGGAAATTTACCAGTAGCACGATTAGTAGGTTCCCATGTTAGTCAGTCACAGGTTATACCAGTATCTTCTCCAATAAATTCTGTCGAATCCCTGGCTGTTACTTCCCAAGCACCAATTCCTTCAACTACATCCACAGCCACTGCCACAAGTTCATTTCTATCTGATATCCCTAATGTCAGTCACTTCCCAGCTGATTCTAAACGTGATCCACGCAGGGATCCCCGTCGCATGGATCCCCGGCGTGTAGCGGTAACTCCTGGAGGGGCAGTTATATCAAGTACGGATGTTACTGGGGCTACAAAATTGGAGTTTGATGATCCTATGTCTTCGATTAAGCCTGTTCCGCATCCTTTTGCAGCTGGTGATGACAATACTGCAGCAGATCTCACAGTCAAAATAAAAAATGATGATATAATCTCTGAAGGCCCCTCAGTTTCAGCACCTGATTGGATAACTCCCAAAACAGAGGTGGAGAGGCCTGGAGATATTCCTCAGATTAAAGAACCAAGTACTTCTTTGGATCCCTCACTCTCTCCCACTGACACACGGGACAAGGATCTAAGTACAGTGAAAGTGTCAGATGATGCTGAAACAGATGGGATAGATTCATCATCTGTTTTTGAGTTTGATCAGTTTTCTCTTGATGATCAAGTTGCATCTCCATCTGAAGATACCTGTCTGGAATTGCCACCACTCCCACCATATGTTGAGCTTTCCGAAGAGCAGGGAATTAAGGTGAAACACATGGCTATTAGGCAAATAATTGAGTCATACAAGCATTTCCATGGGACAGATTGTCAGCAGTTTTGCATGCCATTACTTGCTCGACTAGTAGCTCAGATTGATGACGATAATGACTTTTTTGTTATGCTGCAAAAACACATCCTGGAAGACCACTTGCGAAAGGGCCATGAACTTGTAATGCACGTCTTGTACCATCTTTACTCCCTCATGACATTGGATTCAGCTGGATGCTCTTCATCTTCTGGTGTTTTGTATGAAAAATTTCTCTTGGGAGTGGCCAAATCTCTGCTGGAATCTTTTCCAGCTTCAGACAAGTCTTTTAGTAGACTTCTTGGTGAAGTCCCATTTTTGCCAGAATCTGCATTGAAGATTTTGAATGATATTTGTTATTCTGACATTATTGATCGCGATGGTAAACTTATCCGTGACATTGAACGTGTAACTCAAGGTCTTGGTGCGATATGGAGTTTAATTTTGGGGCGCCCACAAAATCGCCAAGCCTGCTTAGGAATAGCTTTGAAGTGTGCTGTCCACTCACAGGATGAGATTCGGGCAAAAGCTATTCGGCTGGTGACAAACAAGCTCTTTCAGCTTAGTTACATAGCAGAAGATGTTGAGAAATTTGCGACAAATATGCTTCATTCTGCTGTAGAGCATGAGGTTTCAGATACTGGTTTTTTGCAATCTAGACCTACTGAACAAAAAGCTGGGGCAGAGGTTGAAAGTCTGGAGATAAGTGGTACAATACAAGTTTCAGAGGCCACAATTTCTGAAAATGATTCTTCTAGAGTTGCTAAATCAATGGTTCAAAGCGTTCCATCTATATCATTCTCTGAAGCTCAACGCCTGATATCTTTGTATTTTGCATTATGTACAAAGAAACCCAATCTTCTCCGAATTGTTTTCAATGTCTATTGGCAAGCCCCGAAAACTGTAAAGCAGGCTTTTCATCGCCACATTCCTATTCTTGTGAGGGCATTAGGGCAATCTCATTCTGAATTGCTGCAATTTATATCTGATCCACCACAAGGAAGTGAAAATCTTCTGACACAGGTACTCCAAATATTGACCCAAGAGACAACACCATCGTCCGATTTGATATCTACCGTTAAACGTCTGTATGAAACTAAATTTAGAGATGTTACAATTCTTGTTCCGTTGCTATCATCGCTTTCTAAAAAGGAGGTTTTACCAATATTTCCTCAGCTTGTCAACCTTCCACTGGAAAAGTTTCAAAGAGCACTTGCTCTTATACTTCAGGGTTCAGCTCATACGGGTCCAGCTTTAACACCTGTAGAAGTATTGGTTGCAATCCATGGAATTGTTCCCGAGAAAGATGGCCTTGCACTTAAGAAGGCATATGCTTGCTCCGCTTGTTTTGAGCAACGTACAGTGTTCACACAGCAGGTTCTGGGGAAGGCATTGAACCAGATGGTTGATCAAACTCCTTTGCCTCTACTTTTCATGAGAACAGTAATTCAGGCAATTGATGCTTTTCCTACAATGGTTGATTTTGTTATGGAGATACTCTCAAAACTCGTGACTAGACATGTGTGGCGTATGCCAAAACTATGGGTTGGTTTCTTAAAATGTGTATATCAGACTCAGCCACATTCTTTTCATGTATTGTTGCAGTTGCCACCTCCACAACTGGAAAGCGCTCTCAACAGGCATGCTAATCTCCGAGGTGCACTTGCTTCTTATGTCAACCAACCAACTGTGAAATCTTCACTCCAGAAATCAACTTTAGCTGTTCTTGGTCTAGAAAATGAAACCCATGTACAGCAACATTTATCAACTTCATTGCATGCTTCTGACACAAGTACAAGTTCTTCGGTTCATGGCGCAACTCTGACCTGA 4029 0.4234 MAAPTRDQALSLLAAANNHGDVNVKTSSLKQAKNILLSIEPSLAAELFPYMLDLKSSPESLVRKLLIQVIEEIGFKAAEHYPSLLSVLLSFLRDADVGVVKQSIVSGTHIFTNAFEELTVQFQQYGKVERWLEEIWMWMLKFKDAVFGIALEPGPVGIKLLALKFLETFALLFTSDISDPEKSTTEGVRQAVNISRLVGGHPVLDPMVLMSDANRTIGILLNLLQSAGSLPGCLTITVVNCLAAIARKRPQHYDTILSAFFDFDANFQTVKGCHSPSIQYSLRTAFLGFLRCIYSPILESRERLIKSLRAMNAGDAADQVIRQVDKMIKNGDRLTRDARFSKDDLLSTQSAVSGELSRKRSVPRDNEQLANGHEVISKRIRSSSDPHFTLPSPINDSVQDLNSVNGVSPNVPVLDSELTAVEQMIALIGALLAEGERGAESLEILISKIHPDLLADIVITNMKHLPATPPPLARLGNLPVARLVGSHVSQSQVIPVSSPINSVESLAVTSQAPIPSTTSTATATSSFLSDIPNVSHFPADSKRDPRRDPRRMDPRRVAVTPGGAVISSTDVTGATKLEFDDPMSSIKPVPHPFAAGDDNTAADLTVKIKNDDIISEGPSVSAPDWITPKTEVERPGDIPQIKEPSTSLDPSLSPTDTRDKDLSTVKVSDDAETDGIDSSSVFEFDQFSLDDQVASPSEDTCLELPPLPPYVELSEEQGIKVKHMAIRQIIESYKHFHGTDCQQFCMPLLARLVAQIDDDNDFFVMLQKHILEDHLRKGHELVMHVLYHLYSLMTLDSAGCSSSSGVLYEKFLLGVAKSLLESFPASDKSFSRLLGEVPFLPESALKILNDICYSDIIDRDGKLIRDIERVTQGLGAIWSLILGRPQNRQACLGIALKCAVHSQDEIRAKAIRLVTNKLFQLSYIAEDVEKFATNMLHSAVEHEVSDTGFLQSRPTEQKAGAEVESLEISGTIQVSEATISENDSSRVAKSMVQSVPSISFSEAQRLISLYFALCTKKPNLLRIVFNVYWQAPKTVKQAFHRHIPILVRALGQSHSELLQFISDPPQGSENLLTQVLQILTQETTPSSDLISTVKRLYETKFRDVTILVPLLSSLSKKEVLPIFPQLVNLPLEKFQRALALILQGSAHTGPALTPVEVLVAIHGIVPEKDGLALKKAYACSACFEQRTVFTQQVLGKALNQMVDQTPLPLLFMRTVIQAIDAFPTMVDFVMEILSKLVTRHVWRMPKLWVGFLKCVYQTQPHSFHVLLQLPPPQLESALNRHANLRGALASYVNQPTVKSSLQKSTLAVLGLENETHVQQHLSTSLHASDTSTSSSVHGATLT 1342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0311 1342 MobiDBLite consensus disorder prediction 654 673 - -
Lal4g0311 1342 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 1 1316 - -
Lal4g0311 1342 SUPERFAMILY ARM repeat 11 1135 IPR016024 -
Lal4g0311 1342 Pfam Symplekin/PTA1 N-terminal 96 318 IPR032460 -
Lal4g0311 1342 MobiDBLite consensus disorder prediction 537 555 - -
Lal4g0311 1342 Gene3D - 1 340 IPR011989 -
Lal4g0311 1342 MobiDBLite consensus disorder prediction 1320 1342 - -
Lal4g0311 1342 Pfam Symplekin tight junction protein C terminal 1103 1280 IPR022075 -
Lal4g0311 1342 MobiDBLite consensus disorder prediction 614 673 - -
Lal4g0311 1342 MobiDBLite consensus disorder prediction 532 555 - -
Lal4g0311 1342 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 1 1316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0311 Lal-Chr4 2013970 2032647 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0311 K06100 - gmx:100789876 2026.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0311 4 2013970 2032647 Lal4g0311 4 2013970 2032647 ECH
Lal17g0349 17 2268362 2283920 Lal4g0311 4 2013970 2032647 LSH