Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0349 ATGGCCGCTCCTACAAGAGACCAAGCTCTCTCTCTCCTCGCCGCCGCCAACAACCACGGCGACCTCAACGTCAAAACGTCATCCCTCAAACAAGCCAAAGACATTCTCCTCTCCGTCGAACCTTCTGTCGCCGCCGAACTCTTCCCTTACTTGCTCGACCTTCAATCTTCTCCCGAATGTCTCCTTCGCAAATTGCTCATTCAGGTGATTGAGGAAATTGGTTTTAAATCAGTTGAGCATTCTCCTTCACTGGTGTCTATTCTATTGTTATTGTTACGAGATGCCGACGCAGTGGTTGTACAACAATCTATTGTCAGTGGCATAAATATTTTCACTAGAGCCCTTGAGGAGTTGATTGTGCAGTGTCAACAAAATGGTAATGTTGAGAGGTGGCTAGAAGAGGTTTGGATGTGGATGCTCAAGTTCAAGGATGCTGTTTTTGGGATTGCCCTGGAGCCTGGTCCTGCTGGAACAAAGCTGCTTGCACTGAAATTCTTGGAAACATTTGTCTTATTGTTTACATCTGATATGAGTGATCCTGAGAAAACAACAACAGAAGGAGTCAAGCAAGCTGTTAATATCTCATGGTTGATGGGTGGTCACCCTGTTCTTGATACAGCAGTGCTCATGTCAGAGGCAAATAGGACTATTAGTATTTTATTAAATTTACTGCAGGCTGCTGGCGGTCTCCCTGGCTGCTTGACTATAACTGTTGTAAATTGCTTAGCAGCCATAGCAAGGAAAAGGCCACAACACTTTGACATTATTCTTTCTGCATTTCTTGATTTTCATCCAAGTTTTCAAATAGTTAAAGGATGTCATGTTGCCAGCATCCAATACTCCTTTAGAACTGCTTTTTTGGGGTTTGTAAGGTGCACTTATTCACCAATATTAGAGTCAAGAGAAAGATTGATACGGAGCCTGCGAGCTATGAATGCTGGGGATGCTGCTGATCAGGTCATTCGTCAAGTTGAGAAAATGATTAAAAGTGGTGATCGTTTTACCCATGACACTAGAGCTAGCAAGGATGATCTGCCATCAACTCAGTCAGCTGTTTCTGGGGAATTATCTAGAAAAAGATCCGTTCCTCCTGATAATGAGCAATTGGCCAATGGCCACGGGGCCATCTCTAAGCGGATTCGTTCCGGTCCTGACCCTTATTTTACTTCACCACCTCAAATAAATGATTCTGGGAAAGGTCTTAATTCTGTTACTAGAGTATCACCTAATGTTCCTGTGATTGTAAGTGAATTAACTGCTGTGGAGCAAATGATTGCTTTGATTGGTGCTTTGCTTGCTGAAGGAGAAAGAGGTGCTGAATCTCTTGAAATCCTTGTTTCAAAGATTCATCCTGATCTGTTGGCTGATATTGTCATTACAAATATGAAACACTTGCCGAAGACACCCCCACCACTAGCTGGGCATGGAAATTCGCCAGCAACACTACAAGTAGTTTCTCAAGTCAGTCAGTCACAGTATATAGCAGCATCTGCTCCAGTAAATTCTGTCCAATCCTTTGCTGATGCTGCCCAAGCACCAATTCCTTCAACTACAGCCACAACCTCTAGTTCATTACTATCTGATATCCCTAATGTCAGTAACCTTCCAGCTGATTCTAAACGTGATCCACGCAGGGATCCCCGTCGCCTGGATCCACGGCGTGTAGCGGCATCTCCTGGAGGGGCAGCTGTATCAAGTACGGATGATGCCGGGGCTACGAAATTGGAGTTTGATGATCCCGTGTCTTCGATTAAGCTTGTTTCACAGCCTGTTGCAACTGGGGATGATAATACTGCAGTAGATCTCACAAACAACATAAAAAATGATGATATAATCTCTGTAGCCCCCTCTGTTCGATCACCTGATTGGGTAAGTCCCAAAACAGAGGCGGAGAGGCCTGGAGATATTCCCCAGATTGCAGAAGCAAATACTTTGGATCCCTCAATCTCTCCCACTAATACAAGAGATGAGGATCTAAGTACAGTGAAAGTGTCAGATGATGCTGAAAAAAATGAGACAGATTCATTATCTGTTTTAGAGTTTGATCAGTTTTCTCTTGATGGTCAAGTTGCCTCTATGTCAGAAGATGCCTGTCTGGAATTGCCACCACTTCCATCGTATGTTGAGCTTTCCAAAGAGCAGGAAAGTAAGGTGAAAAATATCGCTCTTAGGCAAATAATTGAGTCATATAAGCACTTACATGGGACAGATTGTCAGCAGTTTTGCATGTCATTATTTGCTCGACTAGTAGCTCAGATTGATGACGATAATGACTTTCTTGTTATGCTGCAAAAACACATCCTAGAAGACCACTTGCGAAAGGGCCATGAACTTGTAATGCATGTTTTGTATCATCTGCACTCCCTCACATCATTGGACTCAGCTGGATGCTCTTCGTCTTCTAGTGTTTTGTATGAGAATTTTCTCTTGGGAGTGGCCAAATCTCTATTGGAATCTTTTCCAGCTTCAGACAAGTCTTTTAGTAGACTTCTTGGTGAAGTCCCACTTTTGCCAGAATCTGCCTTGAAGATTTTGAATGATCTTTGCTCCTCTGACATTATTGATCATGATGGAAAAATTATTCGTGATATTGAACGTGTAACTCAAGGTCTTGGTGCCGTATGGAGTTTAATTATAGGCCGTCCACAAAATCGTCAAGTCTGCTTAGGAATAGCTTTGAAGTGTGCTGTCCACTCACAGGATGAGATTCGAGCAAAAGCTATTCGGCTGGTGACAAACAAGCTCTTTCATCTTAGTTACATATCAGAAGATGTTGAGAAATTTGCAACAAGTATGCTTCTTTCTGCTGTACAGCATGAGGTTTCTGATACTGGTCTTTTGCAATCTGGGCCTTCTGAACAAAAAAAGGCTGAGGCAGAGGTTGATAGTACGGAAATAAGTGGCACATCAAAAGTTCCAGAGTCCATAATTTCTGAAAATGATTCTGCTAGAGTTGCTAAAGCAATGCTTCAAAGTGTTCCATCTATATCATTCTCTGATGCTCAACGCCTGATATCTTTGTTTTTTGCATTATGTACAAAGAAACCCAGTCTTCTCCGTATTGTTTTCAATGTCTATTGGCAAGCCCCGAGAACTGTAAAGCAGGCGTTTCATCGCCATGTTCCTATTCTCGTTAGGGCATTAGGGCAATCTCATCATGAATTGCTCCAAATTTTATCTGATCCACCACAAGGAAGTGAAAATCTTCTGACACTGGTACTGCAAATATTAACCCAAGAGACGACACCATCTCCTAATTTGATATCTACTGTTAAACGTCTATATGAAACTAAATTTAGGGATGTTACCATTCTTGTTCCGTTGCTGTCATCACTTTCTACAAAGGAGGTTTTACCAATATTTCCTCAGCTTGTTGACCTTCCACTGGAAAAGTTTCAAAGAGCACTTGCTCTCATACTGCAGTCACGTGCCACTGTTCCATATATCAATTTCCTTTCCGTTCTAGATATGCTAAGCATTCAAAGATGTCAATGGCAGGGTTCAGCTCATACAGGTCCAGCTTTAACACCTGTAGAAGTATTGGTTGCAATCCATGGAATTGTTCCTGAGAAAGATGGCCTTGCACTTAAGAAGGCATGTATCATAACTGATGCTTGCTCGGCTTGTTTTGAGCAACGTACGGTGTTCACACAGCAGGTTCTGGCAAAGGCATTGAACCAGATGGTTGATCAAAGTCCTCTTCCTCTACTTTTCATGAGAACGGTTATTCAGGCCATTGATGCTTTTCCTACAATGGTTGATTTTGTTATGGAGATACTCTCGAAACTTGTGACTAAACAGGTGTGGCATATGCCAAAACTATGGGTGGGTTTCTTAAAATGTGTATATCAGACTCAGCCACATTCTTTTCCTGTATTGTTTCAGTTGCCATCTCCACAACTGGAAAGTGCTCTCAACAGGCATGCTTATCTCAGAGGTCCTCTTGCTTCTTATGCCAACCAACCAACTGTGAAATCTTCACTCCCTAGATCAACTTTAGCAGTTCTTGGTCTAGCAAATGAAACCCATGTACAGCAACACTTATCAACTTCATTGCACCCTTCTGACACTAGTTCTGTGGTTCACGGTGCAACCCTGATGTGA 4104 0.425 MAAPTRDQALSLLAAANNHGDLNVKTSSLKQAKDILLSVEPSVAAELFPYLLDLQSSPECLLRKLLIQVIEEIGFKSVEHSPSLVSILLLLLRDADAVVVQQSIVSGINIFTRALEELIVQCQQNGNVERWLEEVWMWMLKFKDAVFGIALEPGPAGTKLLALKFLETFVLLFTSDMSDPEKTTTEGVKQAVNISWLMGGHPVLDTAVLMSEANRTISILLNLLQAAGGLPGCLTITVVNCLAAIARKRPQHFDIILSAFLDFHPSFQIVKGCHVASIQYSFRTAFLGFVRCTYSPILESRERLIRSLRAMNAGDAADQVIRQVEKMIKSGDRFTHDTRASKDDLPSTQSAVSGELSRKRSVPPDNEQLANGHGAISKRIRSGPDPYFTSPPQINDSGKGLNSVTRVSPNVPVIVSELTAVEQMIALIGALLAEGERGAESLEILVSKIHPDLLADIVITNMKHLPKTPPPLAGHGNSPATLQVVSQVSQSQYIAASAPVNSVQSFADAAQAPIPSTTATTSSSLLSDIPNVSNLPADSKRDPRRDPRRLDPRRVAASPGGAAVSSTDDAGATKLEFDDPVSSIKLVSQPVATGDDNTAVDLTNNIKNDDIISVAPSVRSPDWVSPKTEAERPGDIPQIAEANTLDPSISPTNTRDEDLSTVKVSDDAEKNETDSLSVLEFDQFSLDGQVASMSEDACLELPPLPSYVELSKEQESKVKNIALRQIIESYKHLHGTDCQQFCMSLFARLVAQIDDDNDFLVMLQKHILEDHLRKGHELVMHVLYHLHSLTSLDSAGCSSSSSVLYENFLLGVAKSLLESFPASDKSFSRLLGEVPLLPESALKILNDLCSSDIIDHDGKIIRDIERVTQGLGAVWSLIIGRPQNRQVCLGIALKCAVHSQDEIRAKAIRLVTNKLFHLSYISEDVEKFATSMLLSAVQHEVSDTGLLQSGPSEQKKAEAEVDSTEISGTSKVPESIISENDSARVAKAMLQSVPSISFSDAQRLISLFFALCTKKPSLLRIVFNVYWQAPRTVKQAFHRHVPILVRALGQSHHELLQILSDPPQGSENLLTLVLQILTQETTPSPNLISTVKRLYETKFRDVTILVPLLSSLSTKEVLPIFPQLVDLPLEKFQRALALILQSRATVPYINFLSVLDMLSIQRCQWQGSAHTGPALTPVEVLVAIHGIVPEKDGLALKKACIITDACSACFEQRTVFTQQVLAKALNQMVDQSPLPLLFMRTVIQAIDAFPTMVDFVMEILSKLVTKQVWHMPKLWVGFLKCVYQTQPHSFPVLFQLPSPQLESALNRHAYLRGPLASYANQPTVKSSLPRSTLAVLGLANETHVQQHLSTSLHPSDTSSVVHGATLM 1367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0349 1367 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 1166 1343 - -
Lal17g0349 1367 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 1 1144 - -
Lal17g0349 1367 MobiDBLite consensus disorder prediction 618 668 - -
Lal17g0349 1367 Gene3D - 1 340 IPR011989 -
Lal17g0349 1367 Pfam Symplekin tight junction protein C terminal 1101 1307 IPR022075 -
Lal17g0349 1367 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 1 1144 - -
Lal17g0349 1367 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 1166 1343 - -
Lal17g0349 1367 MobiDBLite consensus disorder prediction 643 658 - -
Lal17g0349 1367 MobiDBLite consensus disorder prediction 945 972 - -
Lal17g0349 1367 SUPERFAMILY ARM repeat 11 1087 IPR016024 -
Lal17g0349 1367 MobiDBLite consensus disorder prediction 538 553 - -
Lal17g0349 1367 MobiDBLite consensus disorder prediction 517 534 - -
Lal17g0349 1367 MobiDBLite consensus disorder prediction 332 392 - -
Lal17g0349 1367 MobiDBLite consensus disorder prediction 517 571 - -
Lal17g0349 1367 Pfam Symplekin/PTA1 N-terminal 96 319 IPR032460 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0349 Lal-Chr17 2268362 2283920 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0349 K06100 - gmx:100789876 1941.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0349 17 2268362 2283920 Lal17g0349 17 2268362 2283920 ECH
Lal17g0349 17 2268362 2283920 Lal4g0311 4 2013970 2032647 LSH