Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0301 ATGAGGTTGATGGAGGAATTACCTTGTAGAAACGGTGATGGTGGTAATGATAAAGATGAAGTAGTGGATGAGATCCAAAATCAATGGTGTCAAGTTGTTAATTCTGGATTTTCATGTCCAAAAAGAGTGGTTGTGGTTGGATATGCTCTTACTTCTAAAAAGATTAAGAGCTTTTTGCAACCAAAGCTTCAAGGTTTAGCTAGGAACAAGGGGATACTATTTGTCGCTATTGACCATAATAGACCTCTTTCAGATCAAGGATCTTTTGATATCGTGTTGCATAAGTTATCAGGGAGAGAGTGGCGGCAGGCTCTAGAGGATTATAGGCAATCACACCCTGAAGTTATTGTTCTGGATCCTCCTGATGCCATACAACATTTACGCAATCGTCAATACATGCTTCAGGCTGTTGCTGATATGAACCTTTCTGATTCTTACGGCAAAGTTGGTGTTCCTCGACAATTAGTTATCAAGAGAGATGCATCAGCCATCCCAGAGTTGGTTAACAGAGCTGGATTGACTTTACCCCTCGTTGCAAAGCCACTTGTTGCTGATGGAAGTGCAAAGTCCCATGAATTATCCCTTGCCTATGAGCAGTACTCCCTTCTAAAACTCGAACCTCCTCTTGTTCTTCAGGAGTTTGTAAACCATGGAGGTGTTCTCTTTAAGGTTTATATAGTTGGTGATGCTATAAAGGTTGTCAGACGGTTTTCATTGCCTGATGTTAGCAAGTGGGAGCTTTCCGAAGATGCTGGCTTATATCACTTTCCAAGGGTATCTTGCGCTGCAGCTTCTGCTGATGATGCGGATCTCGACCCCAATGTTGCTGAGCTTCCTCCGAGACCTTTACTTGAGAAACTGGCTAAGGAGCTTCGTTGGCGATTGGGTCTCCGCCTATTCAACTTGGATATTATACGTGAGTGTGGAACTAGAGATCACTTTTATGTCATTGACATAAACTACTTCCCTGGATATGGCAAAATGCCAGAATATGAACACATATTTACAGACTTCCTGTTGAGCCTGGACCATGGGAATAGTGACGGGATAAACAACAAAGGCTCTTGTTTTGGGAACACAGGCCAGTACACAACAACTGATAGTCATACGTTGTGCTCGGAAAATTGTAAAGTCATTTGA 1140 0.4246 MRLMEELPCRNGDGGNDKDEVVDEIQNQWCQVVNSGFSCPKRVVVVGYALTSKKIKSFLQPKLQGLARNKGILFVAIDHNRPLSDQGSFDIVLHKLSGREWRQALEDYRQSHPEVIVLDPPDAIQHLRNRQYMLQAVADMNLSDSYGKVGVPRQLVIKRDASAIPELVNRAGLTLPLVAKPLVADGSAKSHELSLAYEQYSLLKLEPPLVLQEFVNHGGVLFKVYIVGDAIKVVRRFSLPDVSKWELSEDAGLYHFPRVSCAAASADDADLDPNVAELPPRPLLEKLAKELRWRLGLRLFNLDIIRECGTRDHFYVIDINYFPGYGKMPEYEHIFTDFLLSLDHGNSDGINNKGSCFGNTGQYTTTDSHTLCSENCKVI 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0301 379 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 2 31 344 - -
Lal4g0301 379 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 31 344 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Lal4g0301 379 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain 45 124 IPR041429 -
Lal4g0301 379 Gene3D - 120 324 - -
Lal4g0301 379 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 120 326 - -
Lal4g0301 379 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain 144 340 IPR040464 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0301 Lal-Chr4 1947644 1952736 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0301 K00913 - gmx:100776901 607.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0301 4 1947644 1952736 Lal4g0301 4 1947644 1952736 ECH
Lal17g0341 17 2182049 2187377 Lal4g0301 4 1947644 1952736 LSH